myRT

myRT report for GCA_004337455.1_ASM433745v1

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Seq: SJXI01000040.1 (2216 bp)
Overview 1 RT 1: 1-1659 bp Neighborhood of RT #1 [1, 2051] RVT-GII Feature: gene Location: 1-129 bp Feature: gene Location: 459-2051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 969-1659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 969-1 659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SJXI01000088.1 (113735 bp)
Overview 1 RT 1: 30605-36584 bp Neighborhood of RT #1 [30605, 36584] HemK Haem_oxygenas_2 RVT_N RVT-GII GIIM HmoA Feature: gene Location: 30605-31459 bp Feature: domain Description: HemK Location: 30647-30998 bp Feature: domain Description: HemK Location: 30647-30998 bp Feature: gene Location: 31501-32547 bp Feature: domain Description: Haem_oxygenas_2 Location: 31933-32458 bp Feature: domain Description: Haem_oxygenas_2 Location: 31933-32 458 bp Feature: gene Location: 33030-34835 bp Feature: domain Description: RVT_N Location: 33129-33369 bp Feature: domain Description: RVT_N Location: 3312 9-33369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33426-34071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3342 6-34071 bp Feature: domain Description: GIIM Note: maturase Location: 34137-34368 bp Feature: domain Description: GIIM Note: maturase Location: 34137-34368 bp Feature: gene Location: 35763-36170 bp Feature: domain Description: HmoA Location: 35997-36114 bp Feature: domain Description: HmoA Location: 35997-36114 bp Feature: gene Location: 36231-36584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SJXI01000102.1 (30460 bp)
Overview 1 RT 1: 2992-6361 bp Neighborhood of RT #1 [2992, 6361] RVT-GII GIIM RpoE Feature: gene Location: 2992-3231 bp Feature: gene Location: 3990-4199 bp Feature: gene Location: 4036-4632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4099-4213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4099-4213 bp Feature: domain Description: GIIM Note: maturase Location: 4300-4444 bp Feature: domain Description: GIIM Note: maturase Location: 43 00-4444 bp Feature: gene Location: 4673-5428 bp Feature: domain Description: RpoE Location: 4850-5372 bp Feature: domain Description: RpoE Location: 4850-53 72 bp Feature: gene Location: 5486-6361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SJXI01000198.1 (1803 bp)
Overview 1 RT 1: 292-1627 bp Neighborhood of RT #1 [292, 1671] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 292-1671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-94 6 bp Feature: domain Description: Intron_maturas2 Location: 1060-1282 bp Feature: domain Description: Intron_maturas2 Location: 1060-1282 bp Feature: domain Description: HNHc Note: nucleases Location: 1483-1627 bp Feature: domain Description: HNHc Note: nucleases Location: 14 83-1627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SJXI01000019.1 (36902 bp)
Overview 1 RT 1: 21941-30451 bp Neighborhood of RT #1 [21941, 30451] ALDH_F6_MMSDH YvrE beta_rpt_yvtn RVT-GII STKc_PknB_like COG3899 GAF PleD Feature: gene Location: 21941-23434 bp Feature: domain Description: ALDH_F6_MMSDH Location: 21956-23384 bp Feature: domain Description: ALDH_F6_MMSDH Location: 2195 6-23384 bp Feature: gene Location: 23535-24371 bp Feature: domain Description: YvrE Location: 23589-24072 bp Feature: domain Description: YvrE Location: 235 89-24072 bp Feature: domain Description: beta_rpt_yvtn Location: 24150-24198 bp Feature: domain Description: beta_rpt_yvtn Location: 2415 0-24198 bp Feature: gene Location: 24436-24915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24475-24904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24475 -24904 bp Feature: gene Location: 25058-29968 bp Feature: domain Description: STKc_PknB_like Location: 25208-25856 bp Feature: domain Description: STKc_PknB_like Location: 25 208-25 85 6 bp Feature: domain Description: COG3899 Location: 25937-27725 bp Feature: domain Description: COG3899 Location: 25 937-27725 bp Feature: domain Description: GAF Location: 28967-29366 bp Feature: domain Description: GAF Location: 28967-29366 bp Feature: domain Description: PleD Location: 29366-29945 bp Feature: domain Description: PleD Location: 29366-29945 bp Feature: gene Location: 30245-30451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SJXI01000176.1 (8494 bp)
Overview 1 RT 1: 1001-8323 bp Neighborhood of RT #1 [1001, 8379] RVT_N RVT-GII Intron_maturas2 RVT_N RVT-GII RVT-GII GIIM PRK09776 sensory_box GGDEF Feature: gene Location: 1001-1234 bp Feature: gene Location: 1882-2193 bp Feature: domain Description: RVT_N Location: 1972-2083 bp Feature: domain Description: RVT_N Location: 1972-2083 bp Feature: gene Location: 2615-4378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2876-3674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2876 -36 74 bp Feature: domain Description: Intron_maturas2 Location: 3773-3995 bp Feature: domain Description: Intron_maturas2 Location: 3773-3995 bp Feature: gene Location: 4481-4963 bp Feature: domain Description: RVT_N Location: 4484-4619 bp Feature: domain Description: RVT_N Location: 4484-46 19 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4667-4952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46 6 7-4952 bp Feature: gene Location: 4988-6079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4994-5309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4994-5309 bp Feature: domain Description: GIIM Note: maturase Location: 5411-5612 bp Feature: domain Description: GIIM Note: maturase Location: 5411-56 12 bp Feature: gene Location: 6097-6354 bp Feature: gene Location: 6685-8379 bp Feature: domain Description: PRK09776 Location: 6706-7015 bp Feature: domain Description: PRK09776 Location: 6 706 -7015 bp Feature: domain Description: sensory_box Location: 7270-7357 bp Feature: domain Description: sensory_box Location: 7270-7357 bp Feature: domain Description: GGDEF Location: 7858-8323 bp Feature: domain Description: GGDEF Location: 7858-8323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SJXI01000104.1 (22306 bp)
Overview 1 RT 1: 124-3679 bp Neighborhood of RT #1 [124, 3774] RVT-GII HTH_32 rve_3 Feature: gene Location: 124-870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349-841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349-841 bp Feature: gene Location: 1716-2435 bp Feature: gene Location: 2707-3774 bp Feature: domain Description: HTH_32 Location: 2953-3145 bp Feature: domain Description: HTH_32 Location: 2953-3145 bp Feature: domain Description: rve_3 Location: 3484-3679 bp Feature: domain Description: rve_3 Location: 3484-367 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SJXI01000217.1 (2203 bp)
Overview 1 RT 1: 18-2196 bp Neighborhood of RT #1 [18, 2201] RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 18-440 bp Feature: gene Location: 465-1715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68 1-1338 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1650 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1650 bp Feature: gene Location: 1737-2201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1809-1983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18 09-198 3 bp Feature: domain Description: GIIM Note: maturase Location: 2067-2196 bp Feature: domain Description: GIIM Note: maturase Location: 2067-2196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SJXI01000139.1 (2204 bp)
Overview 1 RT 1: 584-1835 bp Neighborhood of RT #1 [584, 1960] RVT-GII GIIM Feature: gene Location: 584-1960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 899-1529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89 9 -1529 bp Feature: domain Description: GIIM Note: maturase Location: 1616-1835 bp Feature: domain Description: GIIM Note: maturase Location: 1616-1835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT