myRT

myRT report for GCA_004339005.1_ASM433900v1

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Seq: SMGB01000006.1 (575167 bp)
Overview 1 RT 1: 34891-39351 bp 2 RT 2: 141566-146309 bp Neighborhood of RT #1 [34891, 39351] HTH_Tnp_1 HTH_Tnp_1 HTH_32 RVT-GII GIIM Tra5 Neighborhood of RT #2 [141566, 146309] RVT-GII GIIM MoxR Feature: gene Location: 34891-35391 bp Feature: domain Description: HTH_Tnp_1 Location: 34894-35032 bp Feature: domain Description: HTH_Tnp_1 Location: 34894-35032 bp Feature: domain Description: HTH_Tnp_1 Location: 35074-35302 bp Feature: domain Description: HTH_Tnp_1 Location: 35074-35302 bp Feature: gene Location: 35388-35870 bp Feature: domain Description: HTH_32 Location: 35496-35715 bp Feature: domain Description: HTH_32 Location: 35496-3571 5 bp Feature: gene Location: 36496-38028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36769-37507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36769-37507 bp Feature: domain Description: GIIM Note: maturase Location: 37591-37780 bp Feature: domain Description: GIIM Note: maturase Location: 37591 -37780 bp Feature: gene Location: 38163-38753 bp Feature: domain Description: Tra5 Location: 38166-38574 bp Feature: domain Description: Tra5 Location: 381 66-38574 bp Feature: gene Location: 38851-39351 bp Feature: gene Location: 141566-142135 bp Feature: gene Location: 142359-142571 bp Feature: gene Location: 142587-143966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142914-143535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4291 4-1 43535 bp Feature: domain Description: GIIM Note: maturase Location: 143586-143796 bp Feature: domain Description: GIIM Note: maturase Location: 1 43586-1 43796 bp Feature: gene Location: 144258-145283 bp Feature: domain Description: MoxR Location: 144300-145107 bp Feature: domain Description: MoxR Location: 1 44300-1 451 07 bp Feature: gene Location: 145395-146309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMGB01000007.1 (326321 bp)
Overview 1 RT 1: 32208-35292 bp 2 RT 2: 50269-54483 bp 3 RT 3: 95283-107271 bp 4 RT 4: 177302-181359 bp 5 RT 5: 290894-295380 bp Neighborhood of RT #1 [32208, 35297] RVT-GII GIIM PHA02517 PHA02517 Neighborhood of RT #2 [50269, 54485] PHA02517 RVT-GII GIIM InsE Neighborhood of RT #3 [95283, 107271] InsE PHA02517 RVT-GII PinE Zn_ribbon_recom Recombinase DUF5372 RVT-GII PHA02517 Tra8 Tra8 Tra8 RVT-GII GIIM PHA02517 InsE RVT-GII GIIM PHA02517 Neighborhood of RT #4 [177302, 181472] InsE PHA02517 RVT-GII InsE COG3547 Neighborhood of RT #5 [290894, 295382] Tra8 Tra8 Tra8 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 32208-32471 bp Feature: gene Location: 32878-33369 bp Feature: gene Location: 33206-34723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33464-34202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33464-342 02 bp Feature: domain Description: GIIM Note: maturase Location: 34316-34475 bp Feature: domain Description: GIIM Note: maturase Location: 34316-34475 bp Feature: gene Location: 34888-35031 bp Feature: domain Description: PHA02517 Location: 34891-35017 bp Feature: domain Description: PHA02 517 Location: 34891-35017 bp Feature: gene Location: 35055-35297 bp Feature: domain Description: PHA02517 Location: 35058-35292 bp Feature: domain Description: PHA02 517 Location: 35058-352 92 bp Feature: gene Location: 50269-50634 bp Feature: gene Location: 50940-51380 bp Feature: domain Description: PHA02517 Location: 50943-51375 bp Feature: domain Description: PHA02 517 Location: 50943-51375 bp Feature: gene Location: 51515-53047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51788-52526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51788-52 52 6 bp Feature: domain Description: GIIM Note: maturase Location: 52640-52799 bp Feature: domain Description: GIIM Note: maturase Location: 52 640-52 799 bp Feature: gene Location: 53612-54049 bp Feature: gene Location: 54132-54485 bp Feature: domain Description: InsE Location: 54177-54483 bp Feature: domain Description: InsE Location: 54177-54483 bp Feature: gene Location: 95283-95636 bp Feature: domain Description: InsE Location: 95328-95634 bp Feature: domain Description: InsE Location: 9532 8-95634 bp Feature: gene Location: 95636-96094 bp Feature: domain Description: PHA02517 Location: 95702-96056 bp Feature: domain Description: PHA02 517 Location: 95702 -96056 bp Feature: gene Location: 96722-97048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96995-97043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96995-97043 bp Feature: gene Location: 97057-99129 bp Feature: domain Description: PinE Location: 97099-97780 bp Feature: domain Description: PinE Location: 97099-97780 bp Feature: domain Description: Zn_ribbon_recom Location: 98053-98230 bp Feature: domain Description: Zn_ribbon_recom Location: 98053-982 30 bp Feature: domain Description: Recombinase Location: 98773-98875 bp Feature: domain Description: Recombinase Location: 98773-98875 bp Feature: gene Location: 99266-99598 bp Feature: gene Location: 99651-100052 bp Feature: domain Description: DUF5372 Location: 99792-100020 bp Feature: domain Description: DUF5372 Location: 99792 -10002 0 bp Feature: gene Location: 99947-100213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99962-100208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99962 -1002 08 bp Feature: gene Location: 100245-100580 bp Feature: domain Description: PHA02517 Location: 100272-100554 bp Feature: domain Description: PHA02 517 Location: 1002 72 -100554 bp Feature: gene Location: 100723-101970 bp Feature: domain Description: Tra8 Location: 100840-101098 bp Feature: domain Description: Tra8 Location: 100840-101098 bp Feature: domain Description: Tra8 Location: 101200-101560 bp Feature: domain Description: Tra8 Location: 1012 00-101560 bp Feature: domain Description: Tra8 Location: 101617-101953 bp Feature: domain Description: Tra8 Location: 101617-101953 bp Feature: gene Location: 102283-103815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102556-103294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 556-1032 94 bp Feature: domain Description: GIIM Note: maturase Location: 103408-103567 bp Feature: domain Description: GIIM Note: maturase Location: 103408-103567 bp Feature: gene Location: 104443-104841 bp Feature: domain Description: PHA02517 Location: 104446-104806 bp Feature: domain Description: PHA02 517 Location: 104446-104806 bp Feature: gene Location: 104898-105221 bp Feature: domain Description: InsE Location: 104910-105210 bp Feature: domain Description: InsE Location: 104910-1052 10 bp Feature: gene Location: 105419-106255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105422-105734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10542 2 -105734 bp Feature: domain Description: GIIM Note: maturase Location: 105830-106019 bp Feature: domain Description: GIIM Note: maturase Location: 105830-106019 bp Feature: gene Location: 106420-106830 bp Feature: domain Description: PHA02517 Location: 106423-106825 bp Feature: domain Description: PHA02 517 Location: 10642 3-10682 5 bp Feature: gene Location: 107125-107271 bp Feature: gene Location: 177302-177655 bp Feature: domain Description: InsE Location: 177347-177653 bp Feature: domain Description: InsE Location: 177347-177653 bp Feature: gene Location: 177655-178128 bp Feature: domain Description: PHA02517 Location: 177721-178075 bp Feature: domain Description: PHA02 517 Location: 17772 1-178075 bp Feature: gene Location: 178746-179750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179019-179682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179019-179682 bp Feature: gene Location: 179775-180113 bp Feature: domain Description: InsE Location: 179778-179952 bp Feature: domain Description: InsE Location: 179778-179952 bp Feature: gene Location: 180360-181472 bp Feature: domain Description: COG3547 Location: 180522-181359 bp Feature: domain Description: COG3547 Location: 18052 2 -181359 bp Feature: gene Location: 290894-292063 bp Feature: domain Description: Tra8 Location: 290933-291191 bp Feature: domain Description: Tra8 Location: 2 90933-2 91191 bp Feature: domain Description: Tra8 Location: 291293-291653 bp Feature: domain Description: Tra8 Location: 2 912 93-2 91653 bp Feature: domain Description: Tra8 Location: 291710-292046 bp Feature: domain Description: Tra8 Location: 2 91710-2 92 046 bp Feature: gene Location: 292074-292454 bp Feature: domain Description: PHA02517 Location: 292077-292230 bp Feature: domain Description: PHA02 517 Location: 2 92 077-2 92 2 30 bp Feature: gene Location: 292589-294121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292862-293600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 862 -2 93600 bp Feature: domain Description: GIIM Note: maturase Location: 293714-293873 bp Feature: domain Description: GIIM Note: maturase Location: 2 93714-2 93873 bp Feature: gene Location: 294739-295212 bp Feature: domain Description: PHA02517 Location: 294805-295159 bp Feature: domain Description: PHA02 517 Location: 2 94805-2 95159 bp Feature: gene Location: 295212-295382 bp Feature: domain Description: InsE Location: 295215-295380 bp Feature: domain Description: InsE Location: 2 952 15-2 95380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMGB01000003.1 (1330200 bp)
Overview 1 RT 1: 337092-341226 bp Neighborhood of RT #1 [337092, 341231] InsE PHA02517 RVT-GII GIIM PHA02517 SymE_toxin Feature: gene Location: 337092-337415 bp Feature: domain Description: InsE Location: 337104-337404 bp Feature: domain Description: InsE Location: 3 3 7104-3 3 7404 bp Feature: gene Location: 337472-337870 bp Feature: domain Description: PHA02517 Location: 337475-337835 bp Feature: domain Description: PHA02517 Location: 3 3 7475-3 3 783 5 bp Feature: gene Location: 338498-340030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338771-339509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 8771-3 3 9509 bp Feature: domain Description: GIIM Note: maturase Location: 339623-339782 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 9623 -3 3 9782 bp Feature: gene Location: 340156-340614 bp Feature: domain Description: PHA02517 Location: 340159-340588 bp Feature: domain Description: PHA02517 Location: 3 40159-3 40588 bp Feature: gene Location: 340998-341231 bp Feature: domain Description: SymE_toxin Location: 341124-341226 bp Feature: domain Description: SymE_toxin Location: 3 41124-3 41226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMGB01000001.1 (3376200 bp)
Overview 1 RT 1: 769369-778371 bp 2 RT 2: 1346994-1354873 bp 3 RT 3: 1805787-1812858 bp Neighborhood of RT #1 [769369, 778373] PerM uvrA RVT_N RVT-GII GIIM HNH MFS_YajR_like PRK06958 Neighborhood of RT #2 [1346994, 1354896] PRK00529 EarP RVT-GII GIIM HNHc uvrC pgsA Neighborhood of RT #3 [1805787, 1812872] ArnT Xcc1710_like RVT-GII GIIM HNHc PRK09265 Feature: gene Location: 769369-770454 bp Feature: domain Description: PerM Location: 769492-770428 bp Feature: domain Description: PerM Location: 7694 92-7704 28 bp Feature: gene Location: 770595-773468 bp Feature: domain Description: uvrA Location: 770601-773448 bp Feature: domain Description: uvrA Location: 770601-7734 4 8 bp Feature: gene Location: 774661-776205 bp Feature: domain Description: RVT_N Location: 774664-774805 bp Feature: domain Description: RVT_N Location: 774 664 -774 805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774850-775498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774 850-7754 98 bp Feature: domain Description: GIIM Note: maturase Location: 775552-775783 bp Feature: domain Description: GIIM Note: maturase Location: 775552-775783 bp Feature: domain Description: HNH Note: nucleases Location: 776068-776170 bp Feature: domain Description: HNH Note: nucleases Location: 776068-776170 bp Feature: gene Location: 776496-777698 bp Feature: domain Description: MFS_YajR_like Location: 776562-777663 bp Feature: domain Description: MFS_YajR_like Location: 776562-777663 bp Feature: gene Location: 777831-778373 bp Feature: domain Description: PRK06958 Location: 777834-778371 bp Feature: domain Description: PRK06958 Location: 777834 -778371 bp Feature: gene Location: 1346994-1347716 bp Feature: domain Description: PRK00529 Location: 1347162-1347714 bp Feature: domain Description: PRK00529 Location: 134 7162-134 7714 bp Feature: gene Location: 1347775-1348929 bp Feature: domain Description: EarP Location: 1347811-1348912 bp Feature: domain Description: EarP Location: 134 7811-134 8912 bp Feature: gene Location: 1350527-1351825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1350530-1351118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1350530-1351118 bp Feature: domain Description: GIIM Note: maturase Location: 1351172-1351403 bp Feature: domain Description: GIIM Note: maturase Location: 1351172-13514 03 bp Feature: domain Description: HNHc Note: nucleases Location: 1351634-1351787 bp Feature: domain Description: HNHc Note: nucleases Location: 1351634 -1351787 bp Feature: gene Location: 1352043-1354184 bp Feature: domain Description: uvrC Location: 1352079-1354182 bp Feature: domain Description: uvrC Location: 1352079-1354 182 bp Feature: gene Location: 1354300-1354896 bp Feature: domain Description: pgsA Location: 1354309-1354873 bp Feature: domain Description: pgsA Location: 1354 309-1354 873 bp Feature: gene Location: 1805787-1807601 bp Feature: domain Description: ArnT Location: 1805952-1807491 bp Feature: domain Description: ArnT Location: 1805952-18074 91 bp Feature: gene Location: 1807821-1808258 bp Feature: domain Description: Xcc1710_like Location: 1807923-1808247 bp Feature: domain Description: Xcc1710_like Location: 1807923-180824 7 bp Feature: gene Location: 1809769-1811067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1809772-1810360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1809772-1810360 bp Feature: domain Description: GIIM Note: maturase Location: 1810411-1810645 bp Feature: domain Description: GIIM Note: maturase Location: 18104 11-181064 5 bp Feature: domain Description: HNHc Note: nucleases Location: 1810873-1811029 bp Feature: domain Description: HNHc Note: nucleases Location: 1810873-1811029 bp Feature: gene Location: 1811182-1811637 bp Feature: gene Location: 1811634-1812872 bp Feature: domain Description: PRK09265 Location: 1811637-1812858 bp Feature: domain Description: PRK09265 Location: 1811637-1812858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT