myRT

myRT report for GCA_004340865.1_ASM434086v1

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Seq: SLVU01000003.1 (393893 bp)
Overview 1 RT 1: 379418-382384 bp Neighborhood of RT #1 [379418, 382384] Nudix_Hydrolase_9 RVT-GII Feature: gene Location: 379418-379570 bp Feature: gene Location: 379708-380157 bp Feature: domain Description: Nudix_Hydrolase_9 Location: 379762-380122 bp Feature: domain Description: Nudix_Hydrolase_9 Location: 379762-3801 22 bp Feature: gene Location: 380788-381024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380794-380911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 380794-38091 1 bp Feature: gene Location: 381142-381330 bp Feature: gene Location: 381593-382384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_9 (cd04666), RVT-GII

Seq: SLVU01000036.1 (41261 bp)
Overview 1 RT 1: 9937-13091 bp Neighborhood of RT #1 [9937, 13129] DDE_Tnp_IS66_C DDE_Tnp_1_6 RVT-GII RVT-GII IS285 Feature: gene Location: 9937-10122 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9988-10099 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 9988-10099 bp Feature: gene Location: 10336-11031 bp Feature: domain Description: DDE_Tnp_1_6 Location: 10501-10855 bp Feature: domain Description: DDE_Tnp_1_6 Location: 10501-10855 bp Feature: gene Location: 11286-11906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11298-11403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 98-11403 bp Feature: gene Location: 11947-12375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12082-12292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 082 -12 2 92 bp Feature: gene Location: 12437-12568 bp Feature: gene Location: 12617-13129 bp Feature: domain Description: IS285 Location: 12659-13091 bp Feature: domain Description: IS2 85 Location: 12 659-13091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_1_6 (pfam13751), RVT-GII, IS285 (COG3328)

Seq: SLVU01000002.1 (504875 bp)
Overview 1 RT 1: 393671-399859 bp Neighborhood of RT #1 [393671, 399859] COG3744 Phd RVT-UG20 YncB Feature: gene Location: 393671-394048 bp Feature: domain Description: COG3744 Location: 393674-394046 bp Feature: domain Description: COG3 744 Location: 3 93 674-3 94046 bp Feature: gene Location: 394045-394335 bp Feature: domain Description: Phd Location: 394069-394204 bp Feature: domain Description: Phd Location: 3 94069-3 94204 bp Feature: gene Location: 394770-396410 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 395151-395649 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 3 95151-3 95649 bp Feature: gene Location: 397606-398262 bp Feature: domain Description: YncB Location: 397672-398068 bp Feature: domain Description: YncB Location: 3 97672-3 98068 bp Feature: gene Location: 398402-399859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3744 (PIN domain nuclease, a component of toxin-antitoxin system (PIN domain) ), Phd (COG4118), RVT-UG20, YncB (COG1525)