myRT

myRT report for GCA_004341765.1_ASM434176v1

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Seq: SLUV01000029.1 (6325 bp)
Overview 1 RT 1: 2132-5972 bp Neighborhood of RT #1 [2132, 5972] HTH_23 HTH_23 DDE_3 PHA02517 RVT-GII GIIM Feature: gene Location: 2132-3202 bp Feature: domain Description: HTH_23 Location: 2219-2360 bp Feature: domain Description: HTH_23 Location: 221 9-2360 bp Feature: domain Description: HTH_23 Location: 2462-2522 bp Feature: domain Description: HTH_23 Location: 2462-2522 bp Feature: domain Description: DDE_3 Location: 2648-3086 bp Feature: domain Description: DDE_3 Location: 2648-3086 bp Feature: gene Location: 3387-3806 bp Feature: domain Description: PHA02517 Location: 3390-3795 bp Feature: domain Description: PHA0251 7 Location: 3390-3795 bp Feature: gene Location: 3913-5442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4186-4921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 86-4921 bp Feature: domain Description: GIIM Note: maturase Location: 4993-5221 bp Feature: domain Description: GIIM Note: maturase Location: 4993-5221 bp Feature: gene Location: 5580-5972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), DDE_3 (pfam13358), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: SLUV01000045.1 (1334 bp)
Overview 1 RT 1: 95-965 bp Neighborhood of RT #1 [95, 1333] RVT-GII Feature: gene Location: 95-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 78-965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SLUV01000011.1 (68694 bp)
Overview 1 RT 1: 55831-59608 bp Neighborhood of RT #1 [55831, 59608] YbxI RVT-GII RVT-GII GIIM Feature: gene Location: 55831-56823 bp Feature: domain Description: YbxI Location: 56092-56776 bp Feature: domain Description: YbxI Location: 56092-56776 bp Feature: gene Location: 56836-57306 bp Feature: gene Location: 57144-58028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57555-58011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 57555-58011 bp Feature: gene Location: 58025-58621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58034-58244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5803 4-58244 bp Feature: domain Description: GIIM Note: maturase Location: 58322-58538 bp Feature: domain Description: GIIM Note: maturase Location: 583 22-5853 8 bp Feature: gene Location: 58672-59391 bp Feature: gene Location: 59468-59608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbxI (COG2602), RVT-GII, GIIM (pfam08388)

Seq: SLUV01000039.1 (2224 bp)
Overview 1 RT 1: 424-2022 bp Neighborhood of RT #1 [424, 2135] RVT-GII GIIM Feature: gene Location: 424-600 bp Feature: gene Location: 618-2135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921-1683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921-1683 bp Feature: domain Description: GIIM Note: maturase Location: 1752-2022 bp Feature: domain Description: GIIM Note: maturase Location: 1752-2022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)