myRT

myRT report for GCA_004342815.1_ASM434281v1

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Seq: SLWE01000090.1 (1355 bp)
Overview 1 RT 1: 2-1124 bp Neighborhood of RT #1 [2, 1210] RVT_N RVT-GII Feature: gene Location: 2-1210 bp Feature: domain Description: RVT_N Location: 209-452 bp Feature: domain Description: RVT_N Location: 209-452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 497-1124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 497-1 1 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: SLWE01000008.1 (172620 bp)
Overview 1 RT 1: 33640-43755 bp 2 RT 2: 154143-161142 bp Neighborhood of RT #1 [33640, 43757] dnaG RVT-UNC PRK05943 Neighborhood of RT #2 [154143, 161309] pheS pheT RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 33640-34365 bp Feature: gene Location: 34696-36267 bp Feature: domain Description: dnaG Location: 34741-35887 bp Feature: domain Description: dnaG Location: 34741-35887 bp Feature: gene Location: 36218-42178 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 36593-37226 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 36593-372 2 6 bp Feature: gene Location: 42178-43050 bp Feature: gene Location: 43479-43757 bp Feature: domain Description: PRK05943 Location: 43482-43755 bp Feature: domain Description: PRK05943 Location: 43482 -43755 bp Feature: gene Location: 154143-155192 bp Feature: domain Description: pheS Location: 154209-155187 bp Feature: domain Description: pheS Location: 1542 09-155187 bp Feature: gene Location: 155211-157598 bp Feature: domain Description: pheT Location: 155214-157596 bp Feature: domain Description: pheT Location: 1552 14-157596 bp Feature: gene Location: 158055-158996 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 158157-158757 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 158157-158757 bp Feature: gene Location: 158989-160671 bp Feature: domain Description: COG3950 Location: 159208-160570 bp Feature: domain Description: COG3950 Location: 1592 08-160570 bp Feature: gene Location: 160668-161309 bp Feature: domain Description: TIGR02646 Location: 160731-161142 bp Feature: domain Description: TIGR02 646 Location: 160731-161142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT-UG2/RVT-UG10/RVT-UG19/RVT-UG1(RVT-UNC), PRK05943 (50S ribosomal protein L25; Reviewed), pheS (TIGR00468), pheT (PRK09616), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: SLWE01000074.1 (7846 bp)
Overview 1 RT 1: 252-3168 bp Neighborhood of RT #1 [252, 3233] RVT_N RVT-GII GIIM Nudix_Hydrolase_29 Feature: gene Location: 252-1883 bp Feature: domain Description: RVT_N Location: 459-702 bp Feature: domain Description: RVT_N Location: 459-702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-13 74 bp Feature: domain Description: GIIM Note: maturase Location: 1431-1659 bp Feature: domain Description: GIIM Note: maturase Location: 143 1-1659 bp Feature: gene Location: 2236-2490 bp Feature: gene Location: 2757-3233 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 2796-3168 bp Feature: domain Description: Nudix_Hydrolase_29 Location: 2796-3 168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Nudix_Hydrolase_29 (cd04688)

Seq: SLWE01000085.1 (2168 bp)
Overview 1 RT 1: 113-1964 bp Neighborhood of RT #1 [113, 1964] RVT_N RVT-GII GIIM Feature: gene Location: 113-1585 bp Feature: domain Description: RVT_N Location: 161-404 bp Feature: domain Description: RVT_N Location: 161-4 04 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 9-1076 bp Feature: domain Description: GIIM Note: maturase Location: 1136-1361 bp Feature: domain Description: GIIM Note: maturase Location: 1136-1361 bp Feature: gene Location: 1809-1964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)