myRT

myRT report for GCA_004342845.1_ASM434284v1

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Seq: SLXB01000044.1 (9105 bp)
Overview 1 RT 1: 160-1401 bp Neighborhood of RT #1 [160, 1547] RVT-DGRs Phage_holin_4_1 Feature: gene Location: 160-669 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 166-460 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 66-460 bp Feature: gene Location: 647-1027 bp Feature: gene Location: 1050-1547 bp Feature: domain Description: Phage_holin_4_1 Location: 1116-1401 bp Feature: domain Description: Phage_holin_4_1 Location: 1 1 1 6-1 401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: SLXB01000022.1 (69459 bp)
Overview 1 RT 1: 33127-37179 bp Neighborhood of RT #1 [33127, 37179] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 33127-33801 bp Feature: gene Location: 33808-34182 bp Feature: gene Location: 34252-36510 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 34459-35068 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 34459-35068 bp Feature: domain Description: Cas1_I-II-III Location: 35521-36469 bp Feature: domain Description: Cas1_I-II-III Location: 3552 1-36469 bp Feature: gene Location: 36504-36803 bp Feature: domain Description: Cas2_I_II_III Location: 36540-36750 bp Feature: domain Description: Cas2 _I_II_III Location: 36540-36750 bp Feature: gene Location: 37027-37179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: SLXB01000009.1 (118683 bp)
Overview 1 RT 1: 21117-25158 bp Neighborhood of RT #1 [21117, 25158] HU-HIG RVT-DGRs Feature: gene Location: 21117-21248 bp Feature: gene Location: 21454-22005 bp Feature: domain Description: HU-HIG Location: 21457-21832 bp Feature: domain Description: HU-HIG Location: 21457-2183 2 bp Feature: gene Location: 22183-23781 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22453-23167 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22453 -23 167 bp Feature: gene Location: 23806-24543 bp Feature: gene Location: 24616-25158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU-HIG (pfam18291), RVT-DGRs