myRT

myRT report for GCA_004343255.1_ASM434325v1

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Seq: SMDD01000002.1 (681089 bp)
Overview 1 RT 1: 578177-583106 bp Neighborhood of RT #1 [578177, 583117] nucleoid_noc BcsQ RVT-CRISPR-like KOG4768 nucleoid_noc Feature: gene Location: 578177-579034 bp Feature: domain Description: nucleoid_noc Location: 578249-578885 bp Feature: domain Description: nucleoid_noc Location: 578249-578885 bp Feature: gene Location: 579027-579731 bp Feature: domain Description: BcsQ Location: 579030-579717 bp Feature: domain Description: BcsQ Location: 579030-57971 7 bp Feature: gene Location: 579801-581162 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 580080-580617 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 580080-58061 7 bp Feature: domain Description: KOG4768 Location: 580779-580998 bp Feature: domain Description: KOG4768 Location: 580779-580998 bp Feature: gene Location: 581741-582127 bp Feature: gene Location: 582278-583117 bp Feature: domain Description: nucleoid_noc Location: 582347-583106 bp Feature: domain Description: nucleoid_noc Location: 582347-5831 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nucleoid_noc (TIGR04285), BcsQ (COG1192), RVT-CRISPR, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: SMDD01000001.1 (1507067 bp)
Overview 1 RT 1: 891712-898304 bp 2 RT 2: 1034665-1040225 bp Neighborhood of RT #1 [891712, 898324] HEAT_2 RVT-Retrons ADPRase_NUDT5 Neighborhood of RT #2 [1034665, 1040362] PRK13299 PRK11886 RVT-GII ADP_ribosyl_GH Feature: gene Location: 891712-894273 bp Feature: domain Description: HEAT_2 Location: 893551-893791 bp Feature: domain Description: HEAT_2 Location: 893551-893791 bp Feature: gene Location: 894296-895930 bp Feature: gene Location: 895952-897406 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 896513-897131 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 896513-897131 bp Feature: gene Location: 897427-897627 bp Feature: gene Location: 897779-898324 bp Feature: domain Description: ADPRase_NUDT5 Location: 897905-898304 bp Feature: domain Description: ADPRase_NUDT5 Location: 897905-898304 bp Feature: gene Location: 1034665-1035891 bp Feature: domain Description: PRK13299 Location: 1034674-1035856 bp Feature: domain Description: PRK132 99 Location: 1034674-1035856 bp Feature: gene Location: 1035869-1036855 bp Feature: domain Description: PRK11886 Location: 1035899-1036844 bp Feature: domain Description: PRK11886 Location: 1035899-1036844 bp Feature: gene Location: 1036941-1038089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1037256-1037877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10372 56-1037877 bp Feature: gene Location: 1038770-1039138 bp Feature: gene Location: 1039322-1040362 bp Feature: domain Description: ADP_ribosyl_GH Location: 1039337-1040225 bp Feature: domain Description: ADP_ribosyl_GH Location: 1039337-10402 2 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT-Retrons, ADPRase_NUDT5 (cd03424), PRK13299 (tRNA CCA-pyrophosphorylase; Provisional), PRK11886 (bifunctional biotin-- ligase/biotin operon repressor BirA), RVT-GII, ADP_ribosyl_GH (pfam03747)