myRT

myRT report for GCA_004343545.1_ASM434354v1

Download annotations/find similar RTs

Seq: SMCU01000022.1 (48121 bp)
Overview 1 RT 1: 70-3691 bp Neighborhood of RT #1 [70, 3702] Tnp_DNA_bind RVT-GII GIIM HNHc DDE_Tnp_IS240 Rve Feature: gene Location: 70-885 bp Feature: domain Description: Tnp_DNA_bind Location: 97-268 bp Feature: domain Description: Tnp_DNA_bind Location: 97-268 bp Feature: gene Location: 926-1108 bp Feature: gene Location: 1528-3063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1591-2269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 591 -2269 bp Feature: domain Description: GIIM Note: maturase Location: 2335-2548 bp Feature: domain Description: GIIM Note: maturase Location: 2335-2548 bp Feature: domain Description: HNHc Note: nucleases Location: 2836-2980 bp Feature: domain Description: HNHc Note: nucleases Location: 2836-2980 bp Feature: gene Location: 3307-3531 bp Feature: domain Description: DDE_Tnp_IS240 Location: 3319-3478 bp Feature: domain Description: DDE_Tnp_IS240 Location: 331 9-3478 bp Feature: gene Location: 3547-3702 bp Feature: domain Description: Rve Location: 3556-3691 bp Feature: domain Description: Rve Location: 3556-3691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tnp_DNA_bind (pfam14706), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DDE_Tnp_IS240 (pfam13610), Rve (COG3316)

Seq: SMCU01000001.1 (1605516 bp)
Overview 1 RT 1: 1061194-1070373 bp 2 RT 2: 1195685-1198561 bp Neighborhood of RT #1 [1061194, 1070375] ParB_N_Srx_like Pyrophosphatase RVT-UG1 lnt pheT Neighborhood of RT #2 [1195685, 1198561] RVT-Retrons Feature: gene Location: 1061194-1062738 bp Feature: domain Description: ParB_N_Srx_like Location: 1061287-1061878 bp Feature: domain Description: ParB_N_Srx_like Location: 10612 87-1061878 bp Feature: domain Description: Pyrophosphatase Location: 1062238-1062727 bp Feature: domain Description: Pyrophosphatase Location: 1062 2 38-1062 72 7 bp Feature: gene Location: 1062773-1063057 bp Feature: gene Location: 1063342-1067286 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1064077-1064596 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1064077-1064596 bp Feature: domain Description: lnt Location: 1066390-1066783 bp Feature: domain Description: lnt Location: 1066390-1066783 bp Feature: gene Location: 1067355-1067789 bp Feature: gene Location: 1067988-1070375 bp Feature: domain Description: pheT Location: 1067991-1070373 bp Feature: domain Description: pheT Location: 1067991-1070373 bp Feature: gene Location: 1195685-1195822 bp Feature: gene Location: 1195889-1196068 bp Feature: gene Location: 1196240-1197181 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1196339-1196924 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1196339-119692 4 bp Feature: gene Location: 1197171-1198217 bp Feature: gene Location: 1198406-1198561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_Srx_like (cd16390), Pyrophosphatase (pfam00719), RVT-UG1, lnt (TIGR00546), pheT (PRK09616), RVT-Retrons