myRT

myRT report for GCA_004346505.1_ASM434650v1

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Seq: SMBT01000007.1 (177159 bp)
Overview 1 RT 1: 12976-17295 bp Neighborhood of RT #1 [12976, 17297] PBP2_DntR_like_3 nif11_cupin RVT-UG15 gyrB Feature: gene Location: 12976-13218 bp Feature: domain Description: PBP2_DntR_like_3 Location: 12988-13189 bp Feature: domain Description: PBP2_DntR_like_3 Location: 1 2988-1 31 89 bp Feature: gene Location: 13348-13659 bp Feature: domain Description: nif11_cupin Location: 13354-13642 bp Feature: domain Description: nif1 1 _cupin Location: 1 3354-1 3642 bp Feature: gene Location: 14080-15708 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 14599-15001 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 4599-1 5001 bp Feature: gene Location: 16377-16829 bp Feature: gene Location: 17145-17297 bp Feature: domain Description: gyrB Location: 17148-17295 bp Feature: domain Description: gyrB Location: 1 71 48-1 7295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_DntR_like_3 (cd08461), nif11_cupin (TIGR03890), RVT-UG15, gyrB (TIGR01059)

Seq: SMBT01000011.1 (131865 bp)
Overview 1 RT 1: 127205-130548 bp Neighborhood of RT #1 [127205, 130548] RVT-Retrons Feature: gene Location: 127205-128017 bp Feature: gene Location: 127974-128381 bp Feature: gene Location: 128584-129681 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 128821-129373 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 882 1-12 9373 bp Feature: gene Location: 130023-130226 bp Feature: gene Location: 130297-130548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SMBT01000025.1 (30996 bp)
Overview 1 RT 1: 28627-30756 bp Neighborhood of RT #1 [28627, 30836] PyocinActivator PHA02517 RVT-GII GIIM Feature: gene Location: 28627-28881 bp Feature: domain Description: PyocinActivator Location: 28636-28852 bp Feature: domain Description: PyocinActivator Location: 2863 6-28852 bp Feature: gene Location: 29003-29542 bp Feature: domain Description: PHA02517 Location: 29033-29462 bp Feature: domain Description: PHA02517 Location: 2903 3 -29462 bp Feature: gene Location: 29595-30836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29793-30450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29793 -3 0450 bp Feature: domain Description: GIIM Note: maturase Location: 30528-30756 bp Feature: domain Description: GIIM Note: maturase Location: 3 0528-3 0756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PyocinActivator (pfam11112), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)