myRT

myRT report for GCA_004346745.1_ASM434674v1

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Seq: SJOI01000001.1 (6384591 bp)
Overview 1 RT 1: 2351799-2358612 bp 2 RT 2: 5740134-5745132 bp Neighborhood of RT #1 [2351799, 2358716] PRK09951 RVT-GII GIIM Phage_integrase Neighborhood of RT #2 [5740134, 5745188] ICE_VC0181 RVT-UG9 PRK14975 HipB Feature: gene Location: 2351799-2351954 bp Feature: domain Description: PRK09951 Location: 2351802-2351949 bp Feature: domain Description: PRK09951 Location: 2351 802-2351 949 bp Feature: gene Location: 2353589-2355214 bp Feature: gene Location: 2355295-2356689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2355628-2356243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2355628-2356243 bp Feature: domain Description: GIIM Note: maturase Location: 2356294-2356507 bp Feature: domain Description: GIIM Note: maturase Location: 2356294-2356507 bp Feature: gene Location: 2356592-2357089 bp Feature: gene Location: 2357742-2358716 bp Feature: domain Description: Phage_integrase Location: 2358108-2358612 bp Feature: domain Description: Phage_integrase Location: 23581 08-235861 2 bp Feature: gene Location: 5740134-5740484 bp Feature: domain Description: ICE_VC0181 Location: 5740140-5740434 bp Feature: domain Description: ICE_VC01 81 Location: 57401 40-5740434 bp Feature: gene Location: 5740819-5741214 bp Feature: gene Location: 5741455-5743122 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 5741689-5742328 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 5741 689-5742328 bp Feature: gene Location: 5743115-5744683 bp Feature: domain Description: PRK14975 Location: 5743883-5744606 bp Feature: domain Description: PRK1 4975 Location: 5743883-5744606 bp Feature: gene Location: 5744895-5745188 bp Feature: domain Description: HipB Location: 5744916-5745132 bp Feature: domain Description: HipB Location: 574491 6-57451 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09951 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), Phage_integrase (pfam00589), ICE_VC0181 (TIGR02256), RVT-UG9, PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), HipB (COG1396)