myRT

myRT report for GCA_004347525.1_ASM434752v1

Download annotations/find similar RTs

Seq: SLTU01000001.1 (3014053 bp)
Overview 1 RT 1: 967676-973794 bp 2 RT 2: 976620-983233 bp 3 RT 3: 1128833-1135541 bp 4 RT 4: 1150709-1154526 bp 5 RT 5: 1478783-1484416 bp 6 RT 6: 2340432-2346454 bp 7 RT 7: 2637234-2647203 bp Neighborhood of RT #1 [967676, 973808] DUF3876 RVT_N RVT-GII GIIM DUF4134 Neighborhood of RT #2 [976620, 983233] Relaxase Relaxase RVT_N RVT-GII GIIM TraG-D_C Neighborhood of RT #3 [1128833, 1135541] KAP_NTPase TraG-D_C RVT_N RVT-GII GIIM Neighborhood of RT #4 [1150709, 1154591] dnaG RVT-GII Intron_maturas2 Toprim_2 DUF3872 Neighborhood of RT #5 [1478783, 1484416] Dam RVT-DGRs Neighborhood of RT #6 [2340432, 2346465] AAA_25 RVT-GII Intron_maturas2 Toprim_2 COG2865 Neighborhood of RT #7 [2637234, 2647205] DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4141 Bac_Flav_CT_J RVT_N RVT-GII GIIM Bac_Flav_CT_J Bac_Flav_CT_K Feature: gene Location: 967676-968038 bp Feature: domain Description: DUF3876 Location: 967742-968012 bp Feature: domain Description: DUF3876 Location: 967742-96801 2 bp Feature: gene Location: 968154-971108 bp Feature: gene Location: 971319-972974 bp Feature: domain Description: RVT_N Location: 971376-971613 bp Feature: domain Description: RVT_N Location: 971 376-971 61 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971664-972312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971 664-97231 2 bp Feature: domain Description: GIIM Note: maturase Location: 972369-972600 bp Feature: domain Description: GIIM Note: maturase Location: 972369-972600 bp Feature: gene Location: 973276-973569 bp Feature: gene Location: 973590-973808 bp Feature: domain Description: DUF4134 Location: 973611-973794 bp Feature: domain Description: DUF41 34 Location: 97361 1 -973794 bp Feature: gene Location: 976620-978041 bp Feature: domain Description: Relaxase Location: 976944-977235 bp Feature: domain Description: Relaxase Location: 976944-977235 bp Feature: domain Description: Relaxase Location: 977544-977793 bp Feature: domain Description: Relaxase Location: 977544-977793 bp Feature: gene Location: 978365-979141 bp Feature: gene Location: 979860-981512 bp Feature: domain Description: RVT_N Location: 979914-980157 bp Feature: domain Description: RVT_N Location: 97991 4-9801 57 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 980202-980850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 980202-980850 bp Feature: domain Description: GIIM Note: maturase Location: 980904-981135 bp Feature: domain Description: GIIM Note: maturase Location: 980904-981 1 35 bp Feature: gene Location: 981517-982722 bp Feature: domain Description: TraG-D_C Location: 982099-982432 bp Feature: domain Description: TraG-D_C Location: 982099-982432 bp Feature: gene Location: 982838-983233 bp Feature: gene Location: 1128833-1132087 bp Feature: domain Description: KAP_NTPase Location: 1128971-1129949 bp Feature: domain Description: KAP_NTPase Location: 1 1 28971 -1 1 29949 bp Feature: gene Location: 1132219-1133433 bp Feature: domain Description: TraG-D_C Location: 1132801-1133131 bp Feature: domain Description: TraG-D_C Location: 1 1 32801 -1 1 331 31 bp Feature: gene Location: 1133438-1135090 bp Feature: domain Description: RVT_N Location: 1133492-1133735 bp Feature: domain Description: RVT_N Location: 1 1 33492-1 1 33735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1133780-1134428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 33780-1 1 34428 bp Feature: domain Description: GIIM Note: maturase Location: 1134482-1134713 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 34482-1 1 3471 3 bp Feature: gene Location: 1135172-1135345 bp Feature: gene Location: 1135407-1135541 bp Feature: gene Location: 1150709-1150900 bp Feature: domain Description: dnaG Location: 1150787-1150886 bp Feature: domain Description: dnaG Location: 1 1 50787-1 1 50886 bp Feature: gene Location: 1151142-1151315 bp Feature: gene Location: 1151445-1153253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1151709-1152531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 51 709-1 1 52531 bp Feature: domain Description: Intron_maturas2 Location: 1152627-1152912 bp Feature: domain Description: Intron_maturas2 Location: 1 1 52627-1 1 5291 2 bp Feature: gene Location: 1153243-1154091 bp Feature: domain Description: Toprim_2 Location: 1153783-1154038 bp Feature: domain Description: Toprim_2 Location: 1 1 53783-1 1 54038 bp Feature: gene Location: 1154088-1154591 bp Feature: domain Description: DUF3872 Location: 1154139-1154526 bp Feature: domain Description: DUF3872 Location: 1 1 541 39-1 1 54526 bp Feature: gene Location: 1478783-1479625 bp Feature: domain Description: Dam Location: 1478786-1479554 bp Feature: domain Description: Dam Location: 1 478786-1 479554 bp Feature: gene Location: 1479812-1480222 bp Feature: gene Location: 1480236-1481708 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1480575-1481166 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 480575-1 481 1 66 bp Feature: gene Location: 1482067-1483503 bp Feature: gene Location: 1483517-1484416 bp Feature: gene Location: 2340432-2341520 bp Feature: domain Description: AAA_25 Location: 2340582-2341047 bp Feature: domain Description: AAA_25 Location: 2340582-2341 047 bp Feature: gene Location: 2341584-2341766 bp Feature: gene Location: 2342314-2344122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2342578-2343400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2342578-2343400 bp Feature: domain Description: Intron_maturas2 Location: 2343469-2343778 bp Feature: domain Description: Intron_maturas2 Location: 2343469-2343778 bp Feature: gene Location: 2344094-2344948 bp Feature: domain Description: Toprim_2 Location: 2344646-2344925 bp Feature: domain Description: Toprim_2 Location: 2344646-2344925 bp Feature: gene Location: 2345029-2346465 bp Feature: domain Description: COG2865 Location: 2345032-2346454 bp Feature: domain Description: COG2865 Location: 2345032-2346454 bp Feature: gene Location: 2637234-2637569 bp Feature: domain Description: DUF4133 Location: 2637252-2637519 bp Feature: domain Description: DUF41 33 Location: 2637252-263751 9 bp Feature: gene Location: 2637566-2639650 bp Feature: domain Description: Bac_Flav_CT_G Location: 2637569-2639594 bp Feature: domain Description: Bac_Flav_CT_G Location: 2637569-2639594 bp Feature: gene Location: 2640221-2641867 bp Feature: domain Description: RVT_N Location: 2640275-2640518 bp Feature: domain Description: RVT_N Location: 2640275-264051 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2640563-2641208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2640563-2641 208 bp Feature: domain Description: GIIM Note: maturase Location: 2641262-2641493 bp Feature: domain Description: GIIM Note: maturase Location: 2641 262-2641 493 bp Feature: gene Location: 2641876-2642478 bp Feature: domain Description: Bac_Flav_CT_G Location: 2641993-2642452 bp Feature: domain Description: Bac_Flav_CT_G Location: 2641 993-2642452 bp Feature: gene Location: 2642489-2643115 bp Feature: domain Description: DUF4141 Location: 2642498-2642654 bp Feature: domain Description: DUF41 41 Location: 2642498-2642654 bp Feature: gene Location: 2643129-2644037 bp Feature: domain Description: Bac_Flav_CT_J Location: 2643156-2643975 bp Feature: domain Description: Bac_Flav_CT_J Location: 26431 56-2643975 bp Feature: gene Location: 2644055-2644246 bp Feature: gene Location: 2644622-2646304 bp Feature: domain Description: RVT_N Location: 2644676-2644919 bp Feature: domain Description: RVT_N Location: 2644676-264491 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2644964-2645621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2644964-2645621 bp Feature: domain Description: GIIM Note: maturase Location: 2645672-2645906 bp Feature: domain Description: GIIM Note: maturase Location: 2645672-2645906 bp Feature: gene Location: 2646382-2646558 bp Feature: domain Description: Bac_Flav_CT_J Location: 2646403-2646547 bp Feature: domain Description: Bac_Flav_CT_J Location: 2646403-2646547 bp Feature: gene Location: 2646582-2647205 bp Feature: domain Description: Bac_Flav_CT_K Location: 2646600-2647203 bp Feature: domain Description: Bac_Flav_CT_K Location: 2646600-2647203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SLTU01000002.1 (1844339 bp)
Overview 1 RT 1: 374687-378872 bp Neighborhood of RT #1 [374687, 378874] Bac_Flav_CT_J RVT_N RVT-GII GIIM Bac_Flav_CT_J Bac_Flav_CT_K Feature: gene Location: 374687-375592 bp Feature: domain Description: Bac_Flav_CT_J Location: 374708-375530 bp Feature: domain Description: Bac_Flav_CT_J Location: 374708-375530 bp Feature: gene Location: 375610-375801 bp Feature: gene Location: 376177-377859 bp Feature: domain Description: RVT_N Location: 376231-376474 bp Feature: domain Description: RVT_N Location: 3762 31-376474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376519-377176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376519-377176 bp Feature: domain Description: GIIM Note: maturase Location: 377227-377461 bp Feature: domain Description: GIIM Note: maturase Location: 3772 2 7-377461 bp Feature: gene Location: 377937-378128 bp Feature: domain Description: Bac_Flav_CT_J Location: 377958-378105 bp Feature: domain Description: Bac_Flav_CT_J Location: 377958-378105 bp Feature: gene Location: 378251-378874 bp Feature: domain Description: Bac_Flav_CT_K Location: 378269-378872 bp Feature: domain Description: Bac_Flav_CT_K Location: 3782 69-378872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SLTU01000003.1 (862286 bp)
Overview 1 RT 1: 20319-24177 bp 2 RT 2: 509365-513602 bp Neighborhood of RT #1 [20319, 24177] Toprim_2 RVT-GII Intron_maturas2 Neighborhood of RT #2 [509365, 513602] RVT-DGRs Feature: gene Location: 20319-20756 bp Feature: gene Location: 20777-21667 bp Feature: domain Description: Toprim_2 Location: 21344-21629 bp Feature: domain Description: Toprim_2 Location: 213 44-21629 bp Feature: gene Location: 21639-23447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21903-22725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21903 -22725 bp Feature: domain Description: Intron_maturas2 Location: 22794-23103 bp Feature: domain Description: Intron_maturas2 Location: 22794-23 103 bp Feature: gene Location: 23736-23879 bp Feature: gene Location: 23995-24177 bp Feature: gene Location: 509365-509679 bp Feature: gene Location: 509679-510056 bp Feature: gene Location: 510037-511077 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 510247-510871 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 510247-510871 bp Feature: gene Location: 511375-512802 bp Feature: gene Location: 512841-513602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT