myRT

myRT report for GCA_004347605.1_ASM434760v1

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Seq: SLTW01000006.1 (266012 bp)
Overview 1 RT 1: 22764-27166 bp Neighborhood of RT #1 [22764, 27234] TraO dnaG RVT-GII Intron_maturas2 Toprim_2 DUF3872 Feature: gene Location: 22764-23339 bp Feature: domain Description: TraO Location: 22839-23334 bp Feature: domain Description: TraO Location: 22839-23334 bp Feature: gene Location: 23348-23539 bp Feature: domain Description: dnaG Location: 23426-23525 bp Feature: domain Description: dnaG Location: 23426-23525 bp Feature: gene Location: 24087-25895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24351-25173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24351 -251 73 bp Feature: domain Description: Intron_maturas2 Location: 25242-25551 bp Feature: domain Description: Intron_maturas2 Location: 25242-25551 bp Feature: gene Location: 25867-26709 bp Feature: domain Description: Toprim_2 Location: 26431-26683 bp Feature: domain Description: Toprim_2 Location: 26431 -26683 bp Feature: gene Location: 26728-27234 bp Feature: domain Description: DUF3872 Location: 26779-27166 bp Feature: domain Description: DUF3872 Location: 26779-271 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SLTW01000002.1 (723498 bp)
Overview 1 RT 1: 523213-535001 bp Neighborhood of RT #1 [523213, 535027] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF4141 RVT_N RVT-GII GIIM Bac_Flav_CT_J Feature: gene Location: 523213-524382 bp Feature: gene Location: 523465-525036 bp Feature: domain Description: Bac_Flav_CT_G Location: 523468-525034 bp Feature: domain Description: Bac_Flav_CT_G Location: 52 3468-52 5034 bp Feature: gene Location: 525656-527467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 525920-526742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 592 0-52 6742 bp Feature: domain Description: Intron_maturas2 Location: 526814-527144 bp Feature: domain Description: Intron_maturas2 Location: 52 6814-52 7144 bp Feature: domain Description: HNHc Note: nucleases Location: 527288-527438 bp Feature: domain Description: HNHc Note: nucleases Location: 52 72 88-52 7438 bp Feature: gene Location: 527545-527898 bp Feature: domain Description: Bac_Flav_CT_G Location: 527575-527890 bp Feature: domain Description: Bac_Flav_CT_G Location: 52 7575-52 7890 bp Feature: gene Location: 528467-530290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 528731-529553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 8731-52 9553 bp Feature: domain Description: Intron_maturas2 Location: 529727-529967 bp Feature: domain Description: Intron_maturas2 Location: 52 972 7-52 9967 bp Feature: domain Description: HNHc Note: nucleases Location: 530081-530252 bp Feature: domain Description: HNHc Note: nucleases Location: 530081-5302 52 bp Feature: gene Location: 530529-530666 bp Feature: gene Location: 530667-530942 bp Feature: gene Location: 530947-531159 bp Feature: domain Description: DUF4141 Location: 530959-531115 bp Feature: domain Description: DUF4141 Location: 530959-531115 bp Feature: gene Location: 531452-531604 bp Feature: gene Location: 531782-533464 bp Feature: domain Description: RVT_N Location: 531836-532079 bp Feature: domain Description: RVT_N Location: 531836-532 079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532124-532778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532 12 4-532 778 bp Feature: domain Description: GIIM Note: maturase Location: 532832-533063 bp Feature: domain Description: GIIM Note: maturase Location: 532 832 -533063 bp Feature: gene Location: 533448-533990 bp Feature: gene Location: 534014-535027 bp Feature: domain Description: Bac_Flav_CT_J Location: 534035-535001 bp Feature: domain Description: Bac_Flav_CT_J Location: 534035-535001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SLTW01000013.1 (32686 bp)
Overview 1 RT 1: 2-4533 bp Neighborhood of RT #1 [2, 4533] RVT_N RVT-GII Bac_Flav_CT_G DUF4133 DUF4134 RVT_N RVT-GII GIIM Feature: gene Location: 2-1003 bp Feature: domain Description: RVT_N Location: 107-350 bp Feature: domain Description: RVT_N Location: 107-3 50 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-1004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 95-1004 bp Feature: gene Location: 1335-1490 bp Feature: gene Location: 1559-1804 bp Feature: domain Description: Bac_Flav_CT_G Location: 1562-1787 bp Feature: domain Description: Bac_Flav_CT_G Location: 1562-1787 bp Feature: gene Location: 1801-2124 bp Feature: domain Description: DUF4133 Location: 1816-2083 bp Feature: domain Description: DUF413 3 Location: 1816-2083 bp Feature: gene Location: 2148-2390 bp Feature: domain Description: DUF4134 Location: 2295-2385 bp Feature: domain Description: DUF413 4 Location: 2295-23 85 bp Feature: gene Location: 2387-4042 bp Feature: domain Description: RVT_N Location: 2444-2681 bp Feature: domain Description: RVT_N Location: 2444-2681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2732-3380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273 2-3 3 80 bp Feature: domain Description: GIIM Note: maturase Location: 3437-3668 bp Feature: domain Description: GIIM Note: maturase Location: 3 43 7-3 668 bp Feature: gene Location: 4152-4307 bp Feature: gene Location: 4324-4533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SLTW01000016.1 (28833 bp)
Overview 1 RT 1: 26273-28388 bp Neighborhood of RT #1 [26273, 28762] DUF4134 RVT_N RVT-GII GIIM Feature: gene Location: 26273-26491 bp Feature: domain Description: DUF4134 Location: 26294-26477 bp Feature: domain Description: DUF4 134 Location: 26294 -264 77 bp Feature: gene Location: 26616-26825 bp Feature: gene Location: 27107-28762 bp Feature: domain Description: RVT_N Location: 27164-27401 bp Feature: domain Description: RVT_N Location: 27164 -274 01 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27452-28100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274 52-28100 bp Feature: domain Description: GIIM Note: maturase Location: 28157-28388 bp Feature: domain Description: GIIM Note: maturase Location: 28157-28388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SLTW01000001.1 (2993342 bp)
Overview 1 RT 1: 519126-524306 bp 2 RT 2: 2020701-2030146 bp 3 RT 3: 2647023-2649843 bp Neighborhood of RT #1 [519126, 524306] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #2 [2020701, 2030196] Bac_Flav_CT_J DUF4141 RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 Neighborhood of RT #3 [2647023, 2649843] RVT-DGRs Feature: gene Location: 519126-521522 bp Feature: domain Description: Bac_Flav_CT_G Location: 519246-521505 bp Feature: domain Description: Bac_Flav_CT_G Location: 5 19246-5 215 05 bp Feature: gene Location: 520611-521414 bp Feature: gene Location: 521503-523230 bp Feature: domain Description: RVT_N Location: 521608-521851 bp Feature: domain Description: RVT_N Location: 5 21608-5 2185 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521896-522544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 21896-5 225 44 bp Feature: domain Description: GIIM Note: maturase Location: 522595-522829 bp Feature: domain Description: GIIM Note: maturase Location: 5 225 95 -5 22829 bp Feature: gene Location: 523786-524031 bp Feature: domain Description: Bac_Flav_CT_G Location: 523789-524014 bp Feature: domain Description: Bac_Flav_CT_G Location: 5 23789-5 24014 bp Feature: gene Location: 524100-524306 bp Feature: gene Location: 2020701-2021702 bp Feature: domain Description: Bac_Flav_CT_J Location: 2020728-2021691 bp Feature: domain Description: Bac_Flav_CT_J Location: 2020728-2021691 bp Feature: gene Location: 2021716-2022342 bp Feature: domain Description: DUF4141 Location: 2021725-2021881 bp Feature: domain Description: DUF4141 Location: 2021725 -2021881 bp Feature: gene Location: 2022586-2024409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2022850-2023672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202285 0-2023672 bp Feature: domain Description: Intron_maturas2 Location: 2023846-2024086 bp Feature: domain Description: Intron_maturas2 Location: 2023846-2024086 bp Feature: domain Description: HNHc Note: nucleases Location: 2024200-2024371 bp Feature: domain Description: HNHc Note: nucleases Location: 2024200-2024371 bp Feature: gene Location: 2024667-2024855 bp Feature: gene Location: 2024978-2025331 bp Feature: domain Description: Bac_Flav_CT_G Location: 2025008-2025323 bp Feature: domain Description: Bac_Flav_CT_G Location: 2025 008-2025 323 bp Feature: gene Location: 2025409-2027220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2025673-2026495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2025 673-2026495 bp Feature: domain Description: Intron_maturas2 Location: 2026567-2026897 bp Feature: domain Description: Intron_maturas2 Location: 20265 67-2026897 bp Feature: domain Description: HNHc Note: nucleases Location: 2027041-2027191 bp Feature: domain Description: HNHc Note: nucleases Location: 2027041-2027191 bp Feature: gene Location: 2027768-2029864 bp Feature: domain Description: Bac_Flav_CT_G Location: 2027771-2029850 bp Feature: domain Description: Bac_Flav_CT_G Location: 2027771-202985 0 bp Feature: gene Location: 2029861-2030196 bp Feature: domain Description: DUF4133 Location: 2029879-2030146 bp Feature: domain Description: DUF4133 Location: 2029879-2030146 bp Feature: gene Location: 2647023-2647265 bp Feature: gene Location: 2647451-2647936 bp Feature: gene Location: 2647933-2649234 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2648146-2648740 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2648146-2648740 bp Feature: gene Location: 2649331-2649588 bp Feature: gene Location: 2649610-2649843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT