myRT

myRT report for GCA_004348345.1_ASM434834v1

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Seq: SMJZ01000049.1 (46317 bp)
Overview 1 RT 1: 31070-38152 bp Neighborhood of RT #1 [31070, 38163] PRK03584 RVT-CRISPR-like Cupin_6 AraC MglA Feature: gene Location: 31070-33034 bp Feature: domain Description: PRK03584 Location: 31088-33026 bp Feature: domain Description: PRK03584 Location: 31 088-33026 bp Feature: gene Location: 33075-34565 bp Feature: gene Location: 35078-35452 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 35093-35255 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 35093-35255 bp Feature: gene Location: 35560-36561 bp Feature: domain Description: Cupin_6 Location: 35566-36121 bp Feature: domain Description: Cupin_6 Location: 35566-361 21 bp Feature: domain Description: AraC Location: 36172-36481 bp Feature: domain Description: AraC Location: 361 72-36481 bp Feature: gene Location: 36667-38163 bp Feature: domain Description: MglA Location: 36676-38152 bp Feature: domain Description: MglA Location: 36676-381 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMJZ01000113.1 (28318 bp)
Overview 1 RT 1: 2229-4482 bp Neighborhood of RT #1 [2229, 4517] Transposase_20 RVT-GII GIIM group_II_RT_mat Feature: gene Location: 2229-2597 bp Feature: domain Description: Transposase_20 Location: 2238-2430 bp Feature: domain Description: Transposase_2 0 Location: 2 2 38-2 430 bp Feature: gene Location: 2729-2875 bp Feature: gene Location: 3217-4191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3223-3772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 2 3-3772 bp Feature: domain Description: GIIM Note: maturase Location: 3859-4066 bp Feature: domain Description: GIIM Note: maturase Location: 3859-4066 bp Feature: gene Location: 4188-4517 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4272-4482 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 42 72 -4482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMJZ01000065.1 (40245 bp)
Overview 1 RT 1: 1414-9020 bp Neighborhood of RT #1 [1414, 9262] MarR STKc_PknB_like SpoIIE RVT-GII RVT-GII Intron_maturas2 HNHc TMR_SDR_a Feature: gene Location: 1414-1707 bp Feature: domain Description: MarR Location: 1417-1669 bp Feature: domain Description: MarR Location: 1417-1669 bp Feature: gene Location: 1955-3685 bp Feature: domain Description: STKc_PknB_like Location: 2270-3041 bp Feature: domain Description: STKc_PknB_like Location: 2270-3 041 bp Feature: gene Location: 3694-4947 bp Feature: domain Description: SpoIIE Location: 3847-4417 bp Feature: domain Description: SpoIIE Location: 3 847-4417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4474-4639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4474-463 9 bp Feature: gene Location: 5066-7372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5834-6629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583 4-6629 bp Feature: domain Description: Intron_maturas2 Location: 6767-6995 bp Feature: domain Description: Intron_maturas2 Location: 6767-6995 bp Feature: domain Description: HNHc Note: nucleases Location: 7175-7331 bp Feature: domain Description: HNHc Note: nucleases Location: 7175-73 3 1 bp Feature: gene Location: 6932-8389 bp Feature: gene Location: 8615-9262 bp Feature: domain Description: TMR_SDR_a Location: 8621-9020 bp Feature: domain Description: TMR_SDR_a Location: 8621-9020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMJZ01000003.1 (106222 bp)
Overview 1 RT 1: 91731-95154 bp Neighborhood of RT #1 [91731, 95171] AcrR DUF4245 group_II_RT_mat RVT-GII PRK00977 F420H2_quin_red Feature: gene Location: 91731-92339 bp Feature: domain Description: AcrR Location: 91776-92274 bp Feature: domain Description: AcrR Location: 91776-92274 bp Feature: gene Location: 92420-92881 bp Feature: domain Description: DUF4245 Location: 92426-92855 bp Feature: domain Description: DUF4 24 5 Location: 924 26-92855 bp Feature: gene Location: 93163-94431 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 93457-93514 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 934 57-93514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93514-94135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93514 -94 135 bp Feature: gene Location: 94438-94674 bp Feature: domain Description: PRK00977 Location: 94447-94660 bp Feature: domain Description: PRK00977 Location: 94 4 4 7-94 660 bp Feature: gene Location: 94761-95171 bp Feature: domain Description: F420H2_quin_red Location: 94785-95154 bp Feature: domain Description: F4 20H2_quin_red Location: 94 785-95154 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMJZ01000085.1 (33804 bp)
Overview 1 RT 1: 15417-21697 bp Neighborhood of RT #1 [15417, 21879] RimL DDE_Tnp_4 RVT-GII GIIM zf-ISL3 HTH_Tnp_ISL3 COG3464 HAD_sEH-N_like Feature: gene Location: 15417-15959 bp Feature: domain Description: RimL Location: 15441-15927 bp Feature: domain Description: RimL Location: 15 441-15 927 bp Feature: gene Location: 16289-17134 bp Feature: domain Description: DDE_Tnp_4 Location: 16538-17021 bp Feature: domain Description: DDE_Tnp_4 Location: 165 38-17021 bp Feature: gene Location: 17526-18917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17856-18486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1785 6-18486 bp Feature: domain Description: GIIM Note: maturase Location: 18573-18777 bp Feature: domain Description: GIIM Note: maturase Location: 185 73-18777 bp Feature: gene Location: 20030-20872 bp Feature: domain Description: zf-ISL3 Location: 20153-20282 bp Feature: domain Description: zf-ISL3 Location: 2015 3-20282 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 20315-20468 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 20315 -20468 bp Feature: domain Description: COG3464 Location: 20594-20753 bp Feature: domain Description: COG3464 Location: 205 94-2075 3 bp Feature: gene Location: 21154-21879 bp Feature: domain Description: HAD_sEH-N_like Location: 21169-21697 bp Feature: domain Description: HAD_sEH-N_like Location: 21169-21697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMJZ01000372.1 (3438 bp)
Overview 1 RT 1: 3-3227 bp Neighborhood of RT #1 [3, 3292] HTH_29 DDE_3 RVT-GII GIIM Feature: gene Location: 3-212 bp Feature: gene Location: 250-1383 bp Feature: domain Description: HTH_29 Location: 442-598 bp Feature: domain Description: HTH_29 Location: 442-598 bp Feature: domain Description: DDE_3 Location: 844-1240 bp Feature: domain Description: DDE_3 Location: 844-1240 bp Feature: gene Location: 2039-3292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2255-2915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2255-2915 bp Feature: domain Description: GIIM Note: maturase Location: 2996-3227 bp Feature: domain Description: GIIM Note: maturase Location: 2996 -3227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMJZ01000023.1 (57124 bp)
Overview 1 RT 1: 19264-24636 bp Neighborhood of RT #1 [19264, 24641] RVT-GII GIIM NACHT HxlR Feature: gene Location: 19264-20709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19585-20269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19585-20269 bp Feature: domain Description: GIIM Note: maturase Location: 20350-20566 bp Feature: domain Description: GIIM Note: maturase Location: 20350-20566 bp Feature: gene Location: 21924-24041 bp Feature: domain Description: NACHT Location: 22323-22707 bp Feature: domain Description: NACHT Location: 22323-227 07 bp Feature: gene Location: 24258-24641 bp Feature: domain Description: HxlR Location: 24330-24636 bp Feature: domain Description: HxlR Location: 24330-24636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT