myRT

myRT report for GCA_004348685.1_ASM434868v1

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Seq: SMKO01000382.1 (2439 bp)
Overview 1 RT 1: 276-1878 bp Neighborhood of RT #1 [276, 2360] RVT_N RVT-GII GIIM Feature: gene Location: 276-884 bp Feature: gene Location: 591-2360 bp Feature: domain Description: RVT_N Location: 636-873 bp Feature: domain Description: RVT_N Location: 636-873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933-1587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933-1 587 bp Feature: domain Description: GIIM Note: maturase Location: 1644-1878 bp Feature: domain Description: GIIM Note: maturase Location: 1 644-1 878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SMKO01000028.1 (64190 bp)
Overview 1 RT 1: 37127-41131 bp Neighborhood of RT #1 [37127, 41199] HTH_Tnp_4 DDE_Tnp_4 RVT-GII GIIM COG3415 Feature: gene Location: 37127-37738 bp Feature: gene Location: 37805-38578 bp Feature: domain Description: HTH_Tnp_4 Location: 37907-38057 bp Feature: domain Description: HTH_Tnp_4 Location: 37907-38057 bp Feature: domain Description: DDE_Tnp_4 Location: 38117-38555 bp Feature: domain Description: DDE_Tnp_4 Location: 38117-38555 bp Feature: gene Location: 38874-39479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38877-39042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38877-39042 bp Feature: domain Description: GIIM Note: maturase Location: 39135-39339 bp Feature: domain Description: GIIM Note: maturase Location: 39135-39339 bp Feature: gene Location: 39529-40536 bp Feature: gene Location: 40735-41199 bp Feature: domain Description: COG3415 Location: 40777-41131 bp Feature: domain Description: COG3415 Location: 40777-41131 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359), RVT-GII, GIIM (pfam08388), COG3415 (Transposase )

Seq: SMKO01000059.1 (49132 bp)
Overview 1 RT 1: 36435-40366 bp Neighborhood of RT #1 [36435, 40368] XerC RVT_N RVT-GII Transposase_mut DUF4158 Feature: gene Location: 36435-37010 bp Feature: gene Location: 37007-38122 bp Feature: domain Description: XerC Location: 37223-37610 bp Feature: domain Description: XerC Location: 3 7223 -3 7610 bp Feature: gene Location: 38225-39022 bp Feature: domain Description: RVT_N Location: 38330-38567 bp Feature: domain Description: RVT_N Location: 3 83 3 0-3 8567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38627-38951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 8627-3 8951 bp Feature: gene Location: 39242-39934 bp Feature: domain Description: Transposase_mut Location: 39314-39881 bp Feature: domain Description: Transposase_mut Location: 3 93 14-3 9881 bp Feature: gene Location: 40105-40368 bp Feature: domain Description: DUF4158 Location: 40120-40366 bp Feature: domain Description: DUF4158 Location: 40120-403 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT_N (pfam13655), RVT-GII, Transposase_mut (pfam00872), DUF4158 (pfam13700)