myRT

myRT report for GCA_004349615.1_ASM434961v1

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Seq: SATP01000006.1 (171967 bp)
Overview 1 RT 1: 45831-56000 bp Neighborhood of RT #1 [45831, 56038] Laminin_G_3 pfam08757 LRR_AMN1 RVT-DGRs Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 45831-52619 bp Feature: domain Description: Laminin_G_3 Location: 48267-48648 bp Feature: domain Description: Laminin_G_3 Location: 48267-48648 bp Feature: domain Description: pfam08757 Location: 49443-49767 bp Feature: domain Description: pfam08757 Location: 49443-49767 bp Feature: domain Description: LRR_AMN1 Location: 50379-50823 bp Feature: domain Description: LRR_AMN1 Location: 50379-50823 bp Feature: gene Location: 52680-52847 bp Feature: gene Location: 52992-54347 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53268-53859 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53268-53859 bp Feature: gene Location: 54349-54843 bp Feature: gene Location: 54893-56038 bp Feature: domain Description: Arm-DNA-bind_5 Location: 54917-55163 bp Feature: domain Description: Arm-DNA-bind_5 Location: 5491 7-551 63 bp Feature: domain Description: Phage_int_SAM_5 Location: 55202-55487 bp Feature: domain Description: Phage_int_SAM_5 Location: 55202-55487 bp Feature: domain Description: INTN1_C_like Location: 55526-56000 bp Feature: domain Description: INTN1 _C_like Location: 55526-56000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATP01000018.1 (85236 bp)
Overview 1 RT 1: 40338-44330 bp Neighborhood of RT #1 [40338, 44335] ALP RVT-GII PRK00529 Feature: gene Location: 40338-41741 bp Feature: domain Description: ALP Location: 40407-41733 bp Feature: domain Description: ALP Location: 40407-41733 bp Feature: gene Location: 41771-42031 bp Feature: gene Location: 42251-43213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42587-43202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 587-432 02 bp Feature: gene Location: 43382-43654 bp Feature: gene Location: 43769-44335 bp Feature: domain Description: PRK00529 Location: 43772-44330 bp Feature: domain Description: PRK0052 9 Location: 43772 -44330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATP01000013.1 (117345 bp)
Overview 1 RT 1: 37309-42691 bp Neighborhood of RT #1 [37309, 42708] Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF3876 Feature: gene Location: 37309-39708 bp Feature: domain Description: Bac_Flav_CT_G Location: 37312-39697 bp Feature: domain Description: Bac_Flav_CT_G Location: 3 73 12-3 9697 bp Feature: gene Location: 39842-40018 bp Feature: gene Location: 40276-42099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40540-41362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40540-413 62 bp Feature: domain Description: Intron_maturas2 Location: 41542-41779 bp Feature: domain Description: Intron_maturas2 Location: 41542-41779 bp Feature: domain Description: HNHc Note: nucleases Location: 41890-42061 bp Feature: domain Description: HNHc Note: nucleases Location: 41890-42061 bp Feature: gene Location: 42203-42340 bp Feature: domain Description: Bac_Flav_CT_G Location: 42209-42305 bp Feature: domain Description: Bac_Flav_CT_G Location: 42209-423 05 bp Feature: gene Location: 42337-42708 bp Feature: domain Description: DUF3876 Location: 42418-42691 bp Feature: domain Description: DUF3 876 Location: 42418-42691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATP01000043.1 (43760 bp)
Overview 1 RT 1: 39007-41618 bp Neighborhood of RT #1 [39007, 41618] RVT-GII RVT-GII GIIM Feature: gene Location: 39007-39135 bp Feature: gene Location: 39204-39449 bp Feature: gene Location: 39739-40227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40075-40213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 0075-4 0213 bp Feature: gene Location: 40239-40919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40257-40650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 0257-4 0650 bp Feature: domain Description: GIIM Note: maturase Location: 40665-40896 bp Feature: domain Description: GIIM Note: maturase Location: 4 0665-4 0896 bp Feature: gene Location: 41019-41276 bp Feature: gene Location: 41412-41618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATP01000014.1 (116819 bp)
Overview 1 RT 1: 11072-23029 bp Neighborhood of RT #1 [11072, 23029] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 11072-12871 bp Feature: domain Description: rpsA Location: 11141-12755 bp Feature: domain Description: rpsA Location: 11141-1275 5 bp Feature: gene Location: 13040-18868 bp Feature: domain Description: DUF4011 Location: 14195-14708 bp Feature: domain Description: DUF4011 Location: 14195 -14708 bp Feature: domain Description: DEXXQc_SF1 Location: 15047-15647 bp Feature: domain Description: DEXXQc_SF1 Location: 15 047-15 647 bp Feature: domain Description: DEXXQc_SF1 Location: 16484-17234 bp Feature: domain Description: DEXXQc_SF1 Location: 16484-17234 bp Feature: domain Description: SF1_C_Upf1 Location: 17243-17756 bp Feature: domain Description: SF1_C_Upf1 Location: 17243-1775 6 bp Feature: domain Description: MTES_1575 Location: 17906-18194 bp Feature: domain Description: MTES_15 75 Location: 17906-18194 bp Feature: domain Description: DUF3320 Location: 18374-18518 bp Feature: domain Description: DUF3320 Location: 18374-185 18 bp Feature: gene Location: 18902-20035 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19226-19778 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19226-19778 bp Feature: gene Location: 20241-22427 bp Feature: gene Location: 22829-23029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT