myRT

myRT report for GCA_004349635.1_ASM434963v1

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Seq: SATO01000001.1 (273696 bp)
Overview 1 RT 1: 257988-262552 bp Neighborhood of RT #1 [257988, 262552] Trehalase GDB1 KOG4768 RVT-GII RVT-GII group_II_RT_mat Feature: gene Location: 257988-260735 bp Feature: domain Description: Trehalase Location: 259425-259515 bp Feature: domain Description: Trehalase Location: 259425-25951 5 bp Feature: domain Description: GDB1 Location: 259602-260331 bp Feature: domain Description: GDB1 Location: 259602-260331 bp Feature: gene Location: 260921-261409 bp Feature: domain Description: KOG4768 Location: 261161-261407 bp Feature: domain Description: KOG4768 Location: 261 1 61 -261 407 bp Feature: gene Location: 261441-261911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261543-261744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 543-261 744 bp Feature: gene Location: 261982-262125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261985-262105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 985-2621 05 bp Feature: gene Location: 262227-262409 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 262233-262401 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 262233-262401 bp Feature: gene Location: 262406-262552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATO01000106.1 (15710 bp)
Overview 1 RT 1: 14821-15621 bp Neighborhood of RT #1 [14821, 15623] RVT-GII Feature: gene Location: 14821-15183 bp Feature: gene Location: 15187-15396 bp Feature: gene Location: 15426-15623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15429-15621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1542 9-1562 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATO01000103.1 (17051 bp)
Overview 1 RT 1: 1471-4082 bp Neighborhood of RT #1 [1471, 4082] RVT-GII GIIM RVT-GII Feature: gene Location: 1471-1677 bp Feature: gene Location: 1813-2070 bp Feature: gene Location: 2170-2859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2191-2590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2191-2590 bp Feature: domain Description: GIIM Note: maturase Location: 2605-2836 bp Feature: domain Description: GIIM Note: maturase Location: 2605-283 6 bp Feature: gene Location: 2862-3350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3198-3336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 198-3 3 3 6 bp Feature: gene Location: 3640-3885 bp Feature: gene Location: 3954-4082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATO01000018.1 (96926 bp)
Overview 1 RT 1: 55335-67981 bp Neighborhood of RT #1 [55335, 68097] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 55335-55844 bp Feature: gene Location: 56742-58928 bp Feature: gene Location: 59134-60267 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59458-60010 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 594 58-60010 bp Feature: gene Location: 60301-66129 bp Feature: domain Description: DUF4011 Location: 61456-61969 bp Feature: domain Description: DUF4 011 Location: 614 56-61969 bp Feature: domain Description: DEXXQc_SF1 Location: 62308-62866 bp Feature: domain Description: DEXXQc_SF1 Location: 62308-62866 bp Feature: domain Description: DEXXQc_SF1 Location: 63742-64495 bp Feature: domain Description: DEXXQc_SF1 Location: 6374 2-64 4 95 bp Feature: domain Description: TIGR00376 Location: 64627-65017 bp Feature: domain Description: TIGR00376 Location: 64 627-65017 bp Feature: domain Description: MTES_1575 Location: 65167-65455 bp Feature: domain Description: MTES_1575 Location: 65167-654 55 bp Feature: domain Description: DUF3320 Location: 65635-65779 bp Feature: domain Description: DUF3320 Location: 65635-65779 bp Feature: gene Location: 66298-68097 bp Feature: domain Description: rpsA Location: 66367-67981 bp Feature: domain Description: rpsA Location: 66367-67981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATO01000046.1 (43961 bp)
Overview 1 RT 1: 15190-20806 bp Neighborhood of RT #1 [15190, 20823] DUF4134 RVT-GII Intron_maturas2 HNHc DUF4133 Bac_Flav_CT_G Feature: gene Location: 15190-15501 bp Feature: domain Description: DUF4134 Location: 15223-15496 bp Feature: domain Description: DUF4134 Location: 15 223-15 496 bp Feature: gene Location: 15724-16065 bp Feature: gene Location: 16120-17928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16384-17203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16384-17203 bp Feature: domain Description: Intron_maturas2 Location: 17278-17605 bp Feature: domain Description: Intron_maturas2 Location: 17278-17605 bp Feature: domain Description: HNHc Note: nucleases Location: 17758-17905 bp Feature: domain Description: HNHc Note: nucleases Location: 1775 8-17905 bp Feature: gene Location: 17918-18322 bp Feature: domain Description: DUF4133 Location: 18047-18278 bp Feature: domain Description: DUF4133 Location: 18047-18278 bp Feature: gene Location: 18319-20823 bp Feature: domain Description: Bac_Flav_CT_G Location: 18322-20806 bp Feature: domain Description: Bac_Flav_CT_G Location: 18322-20806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATO01000012.1 (129068 bp)
Overview 1 RT 1: 6857-18240 bp Neighborhood of RT #1 [6857, 18240] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 pfam08757 LRR_AMN1 Feature: gene Location: 6857-8002 bp Feature: domain Description: Arm-DNA-bind_5 Location: 6881-7127 bp Feature: domain Description: Arm-DNA-bind_5 Location: 6 881-7127 bp Feature: domain Description: Phage_int_SAM_5 Location: 7166-7451 bp Feature: domain Description: Phage_int_SAM_5 Location: 716 6 -7451 bp Feature: domain Description: INTN1_C_like Location: 7490-7964 bp Feature: domain Description: INTN1_C_like Location: 7490-796 4 bp Feature: gene Location: 8052-8546 bp Feature: gene Location: 8548-9903 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8824-9415 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8824-9415 bp Feature: gene Location: 10276-17064 bp Feature: domain Description: Laminin_G_3 Location: 12712-13093 bp Feature: domain Description: Laminin_G_3 Location: 12712-13093 bp Feature: domain Description: pfam08757 Location: 13888-14212 bp Feature: domain Description: pfam08757 Location: 13888-14212 bp Feature: domain Description: LRR_AMN1 Location: 14818-15289 bp Feature: domain Description: LRR_AMN1 Location: 14818-15289 bp Feature: gene Location: 17074-18240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SATO01000032.1 (64869 bp)
Overview 1 RT 1: 33804-38513 bp Neighborhood of RT #1 [33804, 38527] Bac_Flav_CT_G Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 33804-33977 bp Feature: domain Description: Bac_Flav_CT_G Location: 33807-33963 bp Feature: domain Description: Bac_Flav_CT_G Location: 33807 -33963 bp Feature: gene Location: 33984-34262 bp Feature: domain Description: Bac_Flav_CT_G Location: 34002-34260 bp Feature: domain Description: Bac_Flav_CT_G Location: 34002-34260 bp Feature: gene Location: 34340-36151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34604-35426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34604-35426 bp Feature: domain Description: Intron_maturas2 Location: 35501-35816 bp Feature: domain Description: Intron_maturas2 Location: 35501-35816 bp Feature: domain Description: HNHc Note: nucleases Location: 35972-36122 bp Feature: domain Description: HNHc Note: nucleases Location: 3597 2-36122 bp Feature: gene Location: 36497-36670 bp Feature: gene Location: 36698-38527 bp Feature: domain Description: Bac_Flav_CT_G Location: 36701-38513 bp Feature: domain Description: Bac_Flav_CT_G Location: 367 01-38513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT