myRT

myRT report for GCA_004349975.1_ASM434997v1

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Seq: SCWZ01000002.1 (180559 bp)
Overview 1 RT 1: 119366-125099 bp Neighborhood of RT #1 [119366, 125099] DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 119366-119671 bp Feature: gene Location: 119807-120862 bp Feature: domain Description: DEXHc_Snf Location: 120026-120284 bp Feature: domain Description: DEXHc_Snf Location: 1 20026-1 20284 bp Feature: gene Location: 121459-123177 bp Feature: domain Description: RVT_N Location: 121516-121753 bp Feature: domain Description: RVT_N Location: 1 21 51 6-1 21 753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121804-122455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 804-1 22455 bp Feature: domain Description: GIIM Note: maturase Location: 122509-122740 bp Feature: domain Description: GIIM Note: maturase Location: 1 22509-1 22740 bp Feature: domain Description: HNHc Note: nucleases Location: 122974-123130 bp Feature: domain Description: HNHc Note: nucleases Location: 1 22974-1 231 30 bp Feature: gene Location: 123344-124504 bp Feature: domain Description: SF2_C_SNF Location: 123962-124340 bp Feature: domain Description: SF2_C_SNF Location: 1 23962-1 24340 bp Feature: gene Location: 124563-125099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCWZ01000009.1 (172483 bp)
Overview 1 RT 1: 1-8364 bp 2 RT 2: 24629-35300 bp Neighborhood of RT #1 [1, 8372] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [24629, 35365] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 1-168 bp Feature: domain Description: NTP_transferase_like_1 Location: 7-169 bp Feature: domain Description: NTP_transferase_like_1 Location: 7-169 bp Feature: gene Location: 165-1181 bp Feature: domain Description: COG3178 Location: 168-1167 bp Feature: domain Description: COG3178 Location: 168-1167 bp Feature: gene Location: 2453-4165 bp Feature: domain Description: RVT_N Location: 2510-2753 bp Feature: domain Description: RVT_N Location: 2 510-2 753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2798-3431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 798-3431 bp Feature: domain Description: YkfC Location: 3644-3794 bp Feature: domain Description: YkfC Location: 3644-3794 bp Feature: domain Description: HNH Note: nucleases Location: 3971-4109 bp Feature: domain Description: HNH Note: nucleases Location: 3971-4109 bp Feature: gene Location: 4298-7099 bp Feature: domain Description: LptD Location: 4493-7085 bp Feature: domain Description: LptD Location: 4493-7085 bp Feature: gene Location: 7158-8372 bp Feature: domain Description: PRK10770 Location: 7170-8364 bp Feature: domain Description: PRK10770 Location: 7170-8364 bp Feature: gene Location: 24629-26482 bp Feature: domain Description: PRK05658 Location: 24641-26480 bp Feature: domain Description: PRK05658 Location: 2 4641-2 6480 bp Feature: gene Location: 26589-30326 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 26697-27354 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 2 6697-2 7354 bp Feature: domain Description: PRK09776 Location: 27567-28038 bp Feature: domain Description: PRK09776 Location: 2 7567-2 8038 bp Feature: domain Description: PAS Location: 28098-28620 bp Feature: domain Description: PAS Location: 2 8098-2 862 0 bp Feature: domain Description: PRK10060 Location: 28629-30276 bp Feature: domain Description: PRK10060 Location: 2 862 9-302 76 bp Feature: gene Location: 31407-33092 bp Feature: domain Description: RVT_N Location: 31464-31704 bp Feature: domain Description: RVT_N Location: 31464-31704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31752-32388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31752 -32 388 bp Feature: domain Description: GIIM Note: maturase Location: 32442-32673 bp Feature: domain Description: GIIM Note: maturase Location: 32 442 -32 673 bp Feature: domain Description: HNH Note: nucleases Location: 32925-33063 bp Feature: domain Description: HNH Note: nucleases Location: 32 92 5-33063 bp Feature: gene Location: 33816-34937 bp Feature: domain Description: COG3177 Location: 33834-34926 bp Feature: domain Description: COG3177 Location: 33834-3492 6 bp Feature: gene Location: 35030-35365 bp Feature: domain Description: NERD Location: 35129-35300 bp Feature: domain Description: NERD Location: 3512 9-35300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT