myRT

myRT report for GCA_004350095.1_ASM435009v1

Download annotations/find similar RTs

Seq: SCXG01000010.1 (180570 bp)
Overview 1 RT 1: 119366-125099 bp Neighborhood of RT #1 [119366, 125099] DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 119366-119671 bp Feature: gene Location: 119807-120862 bp Feature: domain Description: DEXHc_Snf Location: 120026-120287 bp Feature: domain Description: DEXHc_Snf Location: 1 20026-1 20287 bp Feature: gene Location: 121459-123177 bp Feature: domain Description: RVT_N Location: 121516-121753 bp Feature: domain Description: RVT_N Location: 1 21 51 6-1 21 753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121804-122455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 804-1 22455 bp Feature: domain Description: GIIM Note: maturase Location: 122509-122740 bp Feature: domain Description: GIIM Note: maturase Location: 1 22509-1 22740 bp Feature: domain Description: HNHc Note: nucleases Location: 122974-123130 bp Feature: domain Description: HNHc Note: nucleases Location: 1 22974-1 231 30 bp Feature: gene Location: 123344-124504 bp Feature: domain Description: SF2_C_SNF Location: 123962-124340 bp Feature: domain Description: SF2_C_SNF Location: 1 23962-1 24340 bp Feature: gene Location: 124563-125099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCXG01000006.1 (223176 bp)
Overview 1 RT 1: 49756-58626 bp 2 RT 2: 74891-85562 bp Neighborhood of RT #1 [49756, 58634] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74891, 85627] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 49756-50430 bp Feature: domain Description: NTP_transferase_like_1 Location: 49762-50401 bp Feature: domain Description: NTP_transferase_like_1 Location: 49762 -50401 bp Feature: gene Location: 50427-51443 bp Feature: domain Description: COG3178 Location: 50430-51429 bp Feature: domain Description: COG3178 Location: 50430-5142 9 bp Feature: gene Location: 52715-54427 bp Feature: domain Description: RVT_N Location: 52772-53015 bp Feature: domain Description: RVT_N Location: 52 772 -53015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53060-53693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53060-53693 bp Feature: domain Description: YkfC Location: 53906-54056 bp Feature: domain Description: YkfC Location: 53906-54056 bp Feature: domain Description: HNH Note: nucleases Location: 54233-54371 bp Feature: domain Description: HNH Note: nucleases Location: 542 33-54371 bp Feature: gene Location: 54560-57361 bp Feature: domain Description: LptD Location: 54755-57347 bp Feature: domain Description: LptD Location: 54755-57347 bp Feature: gene Location: 57420-58634 bp Feature: domain Description: PRK10770 Location: 57432-58626 bp Feature: domain Description: PRK10770 Location: 57432 -5862 6 bp Feature: gene Location: 74891-76744 bp Feature: domain Description: PRK05658 Location: 74903-76742 bp Feature: domain Description: PRK05658 Location: 74903-76742 bp Feature: gene Location: 76851-80588 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76959-77616 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 76959-77616 bp Feature: domain Description: PRK09776 Location: 77829-78300 bp Feature: domain Description: PRK09776 Location: 7782 9-78300 bp Feature: domain Description: PAS Location: 78360-78882 bp Feature: domain Description: PAS Location: 78360-78882 bp Feature: domain Description: PRK10060 Location: 78891-80538 bp Feature: domain Description: PRK10060 Location: 78891-80538 bp Feature: gene Location: 81669-83354 bp Feature: domain Description: RVT_N Location: 81726-81966 bp Feature: domain Description: RVT_N Location: 8172 6-81966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82014-82650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 014-82 650 bp Feature: domain Description: GIIM Note: maturase Location: 82704-82935 bp Feature: domain Description: GIIM Note: maturase Location: 82 704-82 935 bp Feature: domain Description: HNH Note: nucleases Location: 83187-83325 bp Feature: domain Description: HNH Note: nucleases Location: 83187-8332 5 bp Feature: gene Location: 84078-85199 bp Feature: domain Description: COG3177 Location: 84096-85188 bp Feature: domain Description: COG3177 Location: 84096-85188 bp Feature: gene Location: 85292-85627 bp Feature: domain Description: NERD Location: 85391-85562 bp Feature: domain Description: NERD Location: 85391-85562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT