myRT

myRT report for GCA_004350115.1_ASM435011v1

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Seq: SCXH01000006.1 (228166 bp)
Overview 1 RT 1: 54745-63615 bp 2 RT 2: 79880-90551 bp Neighborhood of RT #1 [54745, 63623] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [79880, 90616] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 54745-55419 bp Feature: domain Description: NTP_transferase_like_1 Location: 54751-55390 bp Feature: domain Description: NTP_transferase_like_1 Location: 54751 -55390 bp Feature: gene Location: 55416-56432 bp Feature: domain Description: COG3178 Location: 55419-56418 bp Feature: domain Description: COG31 78 Location: 5541 9-5641 8 bp Feature: gene Location: 57704-59416 bp Feature: domain Description: RVT_N Location: 57761-58004 bp Feature: domain Description: RVT_N Location: 57761 -58004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58049-58682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58049-58682 bp Feature: domain Description: YkfC Location: 58895-59045 bp Feature: domain Description: YkfC Location: 58895-59045 bp Feature: domain Description: HNH Note: nucleases Location: 59222-59360 bp Feature: domain Description: HNH Note: nucleases Location: 59222-59360 bp Feature: gene Location: 59549-62350 bp Feature: domain Description: LptD Location: 59744-62336 bp Feature: domain Description: LptD Location: 59744-62336 bp Feature: gene Location: 62409-63623 bp Feature: domain Description: PRK10770 Location: 62421-63615 bp Feature: domain Description: PRK1 0770 Location: 62421 -6361 5 bp Feature: gene Location: 79880-81733 bp Feature: domain Description: PRK05658 Location: 79892-81731 bp Feature: domain Description: PRK05658 Location: 79892-81 731 bp Feature: gene Location: 81840-85577 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 81948-82605 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 81 948-82605 bp Feature: domain Description: PRK09776 Location: 82818-83289 bp Feature: domain Description: PRK09776 Location: 8281 8-83289 bp Feature: domain Description: PAS Location: 83349-83871 bp Feature: domain Description: PAS Location: 83349-83871 bp Feature: domain Description: PRK10060 Location: 83880-85527 bp Feature: domain Description: PRK1 0060 Location: 83880-85527 bp Feature: gene Location: 86658-88343 bp Feature: domain Description: RVT_N Location: 86715-86955 bp Feature: domain Description: RVT_N Location: 8671 5-86955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87003-87639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87003-87639 bp Feature: domain Description: GIIM Note: maturase Location: 87693-87924 bp Feature: domain Description: GIIM Note: maturase Location: 87693-87924 bp Feature: domain Description: HNH Note: nucleases Location: 88176-88314 bp Feature: domain Description: HNH Note: nucleases Location: 881 76-8831 4 bp Feature: gene Location: 89067-90188 bp Feature: domain Description: COG3177 Location: 89085-90177 bp Feature: domain Description: COG31 77 Location: 89085-901 77 bp Feature: gene Location: 90281-90616 bp Feature: domain Description: NERD Location: 90380-90551 bp Feature: domain Description: NERD Location: 90380-90551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCXH01000004.1 (344258 bp)
Overview 1 RT 1: 119366-125099 bp Neighborhood of RT #1 [119366, 125099] DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 119366-119671 bp Feature: gene Location: 119807-120862 bp Feature: domain Description: DEXHc_Snf Location: 120026-120287 bp Feature: domain Description: DEXHc_Snf Location: 12 002 6-12 02 87 bp Feature: gene Location: 121459-123177 bp Feature: domain Description: RVT_N Location: 121516-121753 bp Feature: domain Description: RVT_N Location: 12 1516-12 1753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121804-122455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 1804-12 2 455 bp Feature: domain Description: GIIM Note: maturase Location: 122509-122740 bp Feature: domain Description: GIIM Note: maturase Location: 12 2 509-12 2 740 bp Feature: domain Description: HNHc Note: nucleases Location: 122974-123130 bp Feature: domain Description: HNHc Note: nucleases Location: 12 2 974-12 3130 bp Feature: gene Location: 123344-124504 bp Feature: domain Description: SF2_C_SNF Location: 123962-124340 bp Feature: domain Description: SF2 _C_SNF Location: 12 3962 -12 4340 bp Feature: gene Location: 124563-125099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT