myRT

myRT report for GCA_004350355.1_ASM435035v1

Download annotations/find similar RTs

Seq: SCWK01000007.1 (180565 bp)
Overview 1 RT 1: 119366-125099 bp Neighborhood of RT #1 [119366, 125099] DEXHc_Snf RVT_N RVT-GII GIIM HNHc SF2_C_SNF Feature: gene Location: 119366-119671 bp Feature: gene Location: 119807-120862 bp Feature: domain Description: DEXHc_Snf Location: 120026-120287 bp Feature: domain Description: DEXHc_Snf Location: 1 20026-1 20287 bp Feature: gene Location: 121459-123177 bp Feature: domain Description: RVT_N Location: 121516-121753 bp Feature: domain Description: RVT_N Location: 1 21 51 6-1 21 753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121804-122455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 804-1 22455 bp Feature: domain Description: GIIM Note: maturase Location: 122509-122740 bp Feature: domain Description: GIIM Note: maturase Location: 1 22509-1 22740 bp Feature: domain Description: HNHc Note: nucleases Location: 122974-123130 bp Feature: domain Description: HNHc Note: nucleases Location: 1 22974-1 231 30 bp Feature: gene Location: 123344-124504 bp Feature: domain Description: SF2_C_SNF Location: 123962-124340 bp Feature: domain Description: SF2_C_SNF Location: 1 23962-1 24340 bp Feature: gene Location: 124563-125099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCWK01000005.1 (208720 bp)
Overview 1 RT 1: 54745-63615 bp 2 RT 2: 79880-90551 bp Neighborhood of RT #1 [54745, 63623] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [79880, 90616] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 54745-55419 bp Feature: domain Description: NTP_transferase_like_1 Location: 54751-55390 bp Feature: domain Description: NTP_transferase_like_1 Location: 54751-55390 bp Feature: gene Location: 55416-56432 bp Feature: domain Description: COG3178 Location: 55419-56418 bp Feature: domain Description: COG3178 Location: 55419-56418 bp Feature: gene Location: 57704-59416 bp Feature: domain Description: RVT_N Location: 57761-58004 bp Feature: domain Description: RVT_N Location: 57761-58004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58049-58682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58049-58682 bp Feature: domain Description: YkfC Location: 58895-59045 bp Feature: domain Description: YkfC Location: 58895-59045 bp Feature: domain Description: HNH Note: nucleases Location: 59222-59360 bp Feature: domain Description: HNH Note: nucleases Location: 592 2 2 -59360 bp Feature: gene Location: 59549-62350 bp Feature: domain Description: LptD Location: 59744-62336 bp Feature: domain Description: LptD Location: 59744-62 336 bp Feature: gene Location: 62409-63623 bp Feature: domain Description: PRK10770 Location: 62421-63615 bp Feature: domain Description: PRK10770 Location: 62 42 1-63615 bp Feature: gene Location: 79880-81733 bp Feature: domain Description: PRK05658 Location: 79892-81731 bp Feature: domain Description: PRK05658 Location: 79892 -81731 bp Feature: gene Location: 81840-85577 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 81948-82605 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 81948-82 605 bp Feature: domain Description: PRK09776 Location: 82818-83289 bp Feature: domain Description: PRK09776 Location: 82 818-832 89 bp Feature: domain Description: PAS Location: 83349-83871 bp Feature: domain Description: PAS Location: 83349-83871 bp Feature: domain Description: PRK10060 Location: 83880-85527 bp Feature: domain Description: PRK10060 Location: 83880-8552 7 bp Feature: gene Location: 86658-88343 bp Feature: domain Description: RVT_N Location: 86715-86955 bp Feature: domain Description: RVT_N Location: 86715-86955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87003-87639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87003-87639 bp Feature: domain Description: GIIM Note: maturase Location: 87693-87924 bp Feature: domain Description: GIIM Note: maturase Location: 87693-8792 4 bp Feature: domain Description: HNH Note: nucleases Location: 88176-88314 bp Feature: domain Description: HNH Note: nucleases Location: 88176-88314 bp Feature: gene Location: 89067-90188 bp Feature: domain Description: COG3177 Location: 89085-90177 bp Feature: domain Description: COG3177 Location: 89085-90177 bp Feature: gene Location: 90281-90616 bp Feature: domain Description: NERD Location: 90380-90551 bp Feature: domain Description: NERD Location: 90380-90551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT