myRT

myRT report for GCA_004350555.1_ASM435055v1

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Seq: SCXM01000019.1 (101215 bp)
Overview 1 RT 1: 30960-38067 bp Neighborhood of RT #1 [30960, 38183] HyuA Hydantoinase_B RVT-GII GIIM Porin_O_P Feature: gene Location: 30960-33050 bp Feature: domain Description: HyuA Location: 30975-33030 bp Feature: domain Description: HyuA Location: 30975-33030 bp Feature: gene Location: 33086-34831 bp Feature: domain Description: Hydantoinase_B Location: 33101-34685 bp Feature: domain Description: Hydantoinase_B Location: 331 01 -34685 bp Feature: gene Location: 35132-36409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35393-36008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35393-36008 bp Feature: domain Description: GIIM Note: maturase Location: 36062-36290 bp Feature: domain Description: GIIM Note: maturase Location: 36062-36290 bp Feature: gene Location: 36345-36824 bp Feature: gene Location: 37005-38183 bp Feature: domain Description: Porin_O_P Location: 37230-38067 bp Feature: domain Description: Porin_O_P Location: 37230-38067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HyuA (COG0145), Hydantoinase_B (pfam02538), RVT-GII, GIIM (pfam08388), Porin_O_P (pfam07396)

Seq: SCXM01000034.1 (62165 bp)
Overview 1 RT 1: 27404-29556 bp Neighborhood of RT #1 [27404, 30089] HipB RVT-UG17 Feature: gene Location: 27404-27685 bp Feature: domain Description: HipB Location: 27425-27659 bp Feature: domain Description: HipB Location: 2 742 5-2 7659 bp Feature: gene Location: 27771-28196 bp Feature: gene Location: 28725-30089 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 28953-29556 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 8953-2 9556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-UG17

Seq: SCXM01000009.1 (271226 bp)
Overview 1 RT 1: 220551-229388 bp Neighborhood of RT #1 [220551, 229417] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 220551-221765 bp Feature: domain Description: PRK10770 Location: 220563-221757 bp Feature: domain Description: PRK10770 Location: 220563 -221757 bp Feature: gene Location: 221824-224613 bp Feature: domain Description: LptD Location: 222019-224599 bp Feature: domain Description: LptD Location: 222019-224599 bp Feature: gene Location: 224746-226458 bp Feature: domain Description: RVT_N Location: 224803-225046 bp Feature: domain Description: RVT_N Location: 224803 -225046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225091-225727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225091-225727 bp Feature: domain Description: YkfC Location: 225937-226087 bp Feature: domain Description: YkfC Location: 22593 7-226087 bp Feature: domain Description: HNH Note: nucleases Location: 226264-226402 bp Feature: domain Description: HNH Note: nucleases Location: 226264-226402 bp Feature: gene Location: 227730-228746 bp Feature: domain Description: COG3178 Location: 227733-228732 bp Feature: domain Description: COG3 178 Location: 22773 3 -22873 2 bp Feature: gene Location: 228743-229417 bp Feature: domain Description: NTP_transferase_like_1 Location: 228749-229388 bp Feature: domain Description: NTP_transferase_like_1 Location: 228749-2293 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: SCXM01000005.1 (172450 bp)
Overview 1 RT 1: 93271-99191 bp Neighborhood of RT #1 [93271, 99191] resist_ArsH KOG0389 SF2_C_SNF RVT_N RVT-GII GIIM HNHc DEXHc_Snf Feature: gene Location: 93271-93993 bp Feature: domain Description: resist_ArsH Location: 93295-93949 bp Feature: domain Description: resist_ArsH Location: 93295-9394 9 bp Feature: gene Location: 94052-95311 bp Feature: domain Description: KOG0389 Location: 94082-94202 bp Feature: domain Description: KOG0389 Location: 94 082-94 202 bp Feature: domain Description: SF2_C_SNF Location: 94751-95147 bp Feature: domain Description: SF2_C_SNF Location: 94 751-9514 7 bp Feature: gene Location: 95379-97097 bp Feature: domain Description: RVT_N Location: 95436-95673 bp Feature: domain Description: RVT_N Location: 954 36-95673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95724-96375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95724 -96375 bp Feature: domain Description: GIIM Note: maturase Location: 96429-96660 bp Feature: domain Description: GIIM Note: maturase Location: 964 29-96660 bp Feature: domain Description: HNHc Note: nucleases Location: 96894-97050 bp Feature: domain Description: HNHc Note: nucleases Location: 96894 -97050 bp Feature: gene Location: 97694-98749 bp Feature: domain Description: DEXHc_Snf Location: 97913-98171 bp Feature: domain Description: DEXHc_Snf Location: 97913-98171 bp Feature: gene Location: 98886-99191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT resist_ArsH (TIGR02690), KOG0389 (KOG0389, SNF2 family DNA-dependent ATPase ), SF2_C_SNF (cd18793), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXHc_Snf (cd17919)

Seq: SCXM01000041.1 (115869 bp)
Overview 1 RT 1: 32060-38701 bp Neighborhood of RT #1 [32060, 38784] CHD CHD RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 32060-33604 bp Feature: domain Description: CHD Location: 32276-32690 bp Feature: domain Description: CHD Location: 32276-32690 bp Feature: domain Description: CHD Location: 32918-33407 bp Feature: domain Description: CHD Location: 32918-33407 bp Feature: gene Location: 34688-34867 bp Feature: gene Location: 35599-36867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35812-36469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 812-36469 bp Feature: domain Description: GIIM Note: maturase Location: 36547-36769 bp Feature: domain Description: GIIM Note: maturase Location: 365 47-36769 bp Feature: gene Location: 37256-37888 bp Feature: domain Description: DUF772 Location: 37397-37592 bp Feature: domain Description: DUF772 Location: 37397-375 92 bp Feature: gene Location: 37957-38784 bp Feature: domain Description: ABC_phnC Location: 37987-38701 bp Feature: domain Description: ABC_phnC Location: 37987-38701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)