myRT

myRT report for GCA_004350605.1_ASM435060v1

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Seq: SCXX01000772.1 (2368 bp)
Overview 1 RT 1: 1-1942 bp Neighborhood of RT #1 [1, 2253] PRK06333 RVT-UG2 Feature: gene Location: 1-408 bp Feature: domain Description: PRK06333 Location: 4-406 bp Feature: domain Description: PRK06333 Location: 4-406 bp Feature: gene Location: 907-2253 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1156-1942 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 1 56-1 942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2

Seq: SCXX01000115.1 (8171 bp)
Overview 1 RT 1: 3-3152 bp Neighborhood of RT #1 [3, 3152] DUF772 RVT-GII GIIM Feature: gene Location: 3-584 bp Feature: domain Description: DUF772 Location: 93-288 bp Feature: domain Description: DUF772 Location: 93-2 88 bp Feature: gene Location: 973-2241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1186-1843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1186-1843 bp Feature: domain Description: GIIM Note: maturase Location: 1921-2143 bp Feature: domain Description: GIIM Note: maturase Location: 192 1-2 143 bp Feature: gene Location: 2391-2789 bp Feature: gene Location: 2973-3152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)

Seq: SCXX01000039.1 (16033 bp)
Overview 1 RT 1: 8738-15980 bp Neighborhood of RT #1 [8738, 16030] COG3177 RVT_N RVT-GII GIIM HNH PRK09776 PAS PRK10060 Feature: gene Location: 8738-9859 bp Feature: domain Description: COG3177 Location: 8756-9848 bp Feature: domain Description: COG3 177 Location: 8756-9848 bp Feature: gene Location: 10118-10255 bp Feature: gene Location: 10583-12268 bp Feature: domain Description: RVT_N Location: 10640-10880 bp Feature: domain Description: RVT_N Location: 10640-10880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10928-11564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10928-11564 bp Feature: domain Description: GIIM Note: maturase Location: 11618-11849 bp Feature: domain Description: GIIM Note: maturase Location: 11618-11849 bp Feature: domain Description: HNH Note: nucleases Location: 12101-12239 bp Feature: domain Description: HNH Note: nucleases Location: 12101-1223 9 bp Feature: gene Location: 13349-16030 bp Feature: domain Description: PRK09776 Location: 13367-13742 bp Feature: domain Description: PRK09776 Location: 13 3 67-13 742 bp Feature: domain Description: PAS Location: 13784-14324 bp Feature: domain Description: PAS Location: 13 784-143 24 bp Feature: domain Description: PRK10060 Location: 14333-15980 bp Feature: domain Description: PRK10060 Location: 143 3 3 -15980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)

Seq: SCXX01000128.1 (14151 bp)
Overview 1 RT 1: 1279-8528 bp Neighborhood of RT #1 [1279, 8581] dut PRK05579 RVT_N RVT-GII GIIM HNHc PBP2_DppA_like Feature: gene Location: 1279-1734 bp Feature: domain Description: dut Location: 1285-1729 bp Feature: domain Description: dut Location: 1285-1729 bp Feature: gene Location: 1742-2950 bp Feature: domain Description: PRK05579 Location: 1748-2942 bp Feature: domain Description: PRK05579 Location: 174 8-294 2 bp Feature: gene Location: 3162-4844 bp Feature: domain Description: RVT_N Location: 3171-3414 bp Feature: domain Description: RVT_N Location: 3171-34 14 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3462-4113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34 62-4 113 bp Feature: domain Description: GIIM Note: maturase Location: 4191-4419 bp Feature: domain Description: GIIM Note: maturase Location: 4 191-4 4 19 bp Feature: domain Description: HNHc Note: nucleases Location: 4647-4803 bp Feature: domain Description: HNHc Note: nucleases Location: 4 64 7-4 803 bp Feature: gene Location: 5938-6948 bp Feature: gene Location: 6974-8581 bp Feature: domain Description: PBP2_DppA_like Location: 7073-8528 bp Feature: domain Description: PBP2_DppA_like Location: 7073-8528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PBP2_DppA_like (cd08493)