myRT

myRT report for GCA_004351215.1_ASM435121v1

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Seq: SCYN01000007.1 (28613 bp)
Overview 1 RT 1: 3247-8596 bp Neighborhood of RT #1 [3247, 8646] INT_Rci_Hp1_C SLATT_5 RVT-UG17 FACL_FadD13-like Feature: gene Location: 3247-4116 bp Feature: domain Description: INT_Rci_Hp1_C Location: 3526-3985 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 3526-3985 bp Feature: gene Location: 4527-5126 bp Feature: domain Description: SLATT_5 Location: 4590-5091 bp Feature: domain Description: SLATT_5 Location: 4590-5091 bp Feature: gene Location: 5126-6490 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5354-5957 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 5354-5957 bp Feature: gene Location: 6563-6784 bp Feature: gene Location: 7099-8646 bp Feature: domain Description: FACL_FadD13-like Location: 7126-8596 bp Feature: domain Description: FACL_FadD1 3-like Location: 71 26-8596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), SLATT_5 (pfam18160), RVT-UG17, FACL_FadD13-like (cd17631)

Seq: SCYN01000006.1 (30148 bp)
Overview 1 RT 1: 13856-23911 bp Neighborhood of RT #1 [13856, 23913] HTH_3 HTH_3 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 13856-14320 bp Feature: gene Location: 14462-14929 bp Feature: domain Description: HTH_3 Location: 14498-14648 bp Feature: domain Description: HTH_3 Location: 14498-14648 bp Feature: domain Description: HTH_3 Location: 14831-14903 bp Feature: domain Description: HTH_3 Location: 14831-14903 bp Feature: gene Location: 15459-17144 bp Feature: domain Description: RVT_N Location: 15516-15756 bp Feature: domain Description: RVT_N Location: 15516-15756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15804-16440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15804-16440 bp Feature: domain Description: GIIM Note: maturase Location: 16494-16725 bp Feature: domain Description: GIIM Note: maturase Location: 16494-1672 5 bp Feature: domain Description: HNH Note: nucleases Location: 16977-17115 bp Feature: domain Description: HNH Note: nucleases Location: 16977-17115 bp Feature: gene Location: 18225-21953 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 18324-18981 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 1832 4-18981 bp Feature: domain Description: PRK09776 Location: 19194-19665 bp Feature: domain Description: PRK09776 Location: 19194-19665 bp Feature: domain Description: PAS Location: 19713-20247 bp Feature: domain Description: PAS Location: 19713-2 02 47 bp Feature: domain Description: PRK10060 Location: 20256-21903 bp Feature: domain Description: PRK10060 Location: 2 02 56-2 1903 bp Feature: gene Location: 22060-23913 bp Feature: domain Description: PRK05658 Location: 22072-23911 bp Feature: domain Description: PRK05658 Location: 2 2 072 -2 3911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: SCYN01000010.1 (41424 bp)
Overview 1 RT 1: 3-7933 bp Neighborhood of RT #1 [3, 7962] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 3-671 bp Feature: domain Description: PRK10770 Location: 15-669 bp Feature: domain Description: PRK10770 Location: 15-669 bp Feature: gene Location: 730-3513 bp Feature: domain Description: LptD Location: 925-3499 bp Feature: domain Description: LptD Location: 925-3 499 bp Feature: gene Location: 3646-5358 bp Feature: domain Description: RVT_N Location: 3703-3946 bp Feature: domain Description: RVT_N Location: 3 703 -3 946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3991-4624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 991-4624 bp Feature: domain Description: YkfC Location: 4837-4987 bp Feature: domain Description: YkfC Location: 483 7-4987 bp Feature: domain Description: HNH Note: nucleases Location: 5164-5302 bp Feature: domain Description: HNH Note: nucleases Location: 5164-53 02 bp Feature: gene Location: 6275-7291 bp Feature: domain Description: COG3178 Location: 6278-7277 bp Feature: domain Description: COG3 178 Location: 6278-7277 bp Feature: gene Location: 7288-7962 bp Feature: domain Description: NTP_transferase_like_1 Location: 7294-7933 bp Feature: domain Description: NTP_transferase_like_1 Location: 7294-793 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)