myRT

myRT report for GCA_004351415.1_ASM435141v1

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Seq: SCZE01000047.1 (26272 bp)
Overview 1 RT 1: 8632-19366 bp Neighborhood of RT #1 [8632, 19368] NERD COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 8632-8967 bp Feature: domain Description: NERD Location: 8731-8902 bp Feature: domain Description: NERD Location: 8731 -8902 bp Feature: gene Location: 9060-10181 bp Feature: domain Description: COG3177 Location: 9078-10170 bp Feature: domain Description: COG31 77 Location: 9078-1 01 70 bp Feature: gene Location: 10905-12590 bp Feature: domain Description: RVT_N Location: 10962-11202 bp Feature: domain Description: RVT_N Location: 1 0962-1 1 202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11250-11886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 250-1 1 886 bp Feature: domain Description: GIIM Note: maturase Location: 11940-12171 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 940-1 21 71 bp Feature: domain Description: HNH Note: nucleases Location: 12423-12561 bp Feature: domain Description: HNH Note: nucleases Location: 1 2423-1 2561 bp Feature: gene Location: 13671-17408 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 13779-14436 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 1 3779-1 4436 bp Feature: domain Description: PRK09776 Location: 14649-15120 bp Feature: domain Description: PRK09776 Location: 1 4649-1 51 20 bp Feature: domain Description: PAS Location: 15180-15702 bp Feature: domain Description: PAS Location: 1 51 80-1 5702 bp Feature: domain Description: PRK10060 Location: 15711-17358 bp Feature: domain Description: PRK1 0060 Location: 1 571 1 -1 7358 bp Feature: gene Location: 17515-19368 bp Feature: domain Description: PRK05658 Location: 17527-19366 bp Feature: domain Description: PRK05658 Location: 1 7527-1 9366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCZE01000386.1 (3368 bp)
Overview 1 RT 1: 135-2780 bp Neighborhood of RT #1 [135, 3367] RVT_N RVT-GII GIIM HNHc DEXHc_Snf Feature: gene Location: 135-1853 bp Feature: domain Description: RVT_N Location: 192-429 bp Feature: domain Description: RVT_N Location: 192 -42 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480-1131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480-1131 bp Feature: domain Description: GIIM Note: maturase Location: 1185-1416 bp Feature: domain Description: GIIM Note: maturase Location: 1185-1416 bp Feature: domain Description: HNHc Note: nucleases Location: 1650-1806 bp Feature: domain Description: HNHc Note: nucleases Location: 1650-1806 bp Feature: gene Location: 2123-2251 bp Feature: gene Location: 2450-3367 bp Feature: domain Description: DEXHc_Snf Location: 2534-2780 bp Feature: domain Description: DEXHc_Snf Location: 2 534-2 780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SCZE01000026.1 (44794 bp)
Overview 1 RT 1: 9140-17781 bp Neighborhood of RT #1 [9140, 17810] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 9140-10354 bp Feature: domain Description: PRK10770 Location: 9152-10346 bp Feature: domain Description: PRK10770 Location: 9152-103 46 bp Feature: gene Location: 10413-12836 bp Feature: domain Description: LptD Location: 10494-12822 bp Feature: domain Description: LptD Location: 10494-12822 bp Feature: gene Location: 13139-14851 bp Feature: domain Description: RVT_N Location: 13196-13439 bp Feature: domain Description: RVT_N Location: 13 196-13 43 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13484-14117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 484-14117 bp Feature: domain Description: YkfC Location: 14330-14480 bp Feature: domain Description: YkfC Location: 143 3 0-14480 bp Feature: domain Description: HNH Note: nucleases Location: 14657-14795 bp Feature: domain Description: HNH Note: nucleases Location: 14657-14795 bp Feature: gene Location: 16123-17139 bp Feature: domain Description: COG3178 Location: 16126-17125 bp Feature: domain Description: COG3 178 Location: 16126-17125 bp Feature: gene Location: 17136-17810 bp Feature: domain Description: NTP_transferase_like_1 Location: 17142-17781 bp Feature: domain Description: NTP_transferase_like_1 Location: 17142-17781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT