myRT

myRT report for GCA_004358795.1_ASM435879v1

Download annotations/find similar RTs

Seq: SMZU01000006.1 (325408 bp)
Overview 1 RT 1: 5439-10552 bp 2 RT 2: 296935-302966 bp Neighborhood of RT #1 [5439, 10552] DUF4394 DUF4394 DUF4394 RVT-GII KOG1591 Neighborhood of RT #2 [296935, 302983] rpsF PRK09601 RVT-GII GIIM MopB_3 DMSO_red_II_alp COG4481 Feature: gene Location: 5439-6251 bp Feature: domain Description: DUF4394 Location: 5469-5571 bp Feature: domain Description: DUF4394 Location: 5469-5571 bp Feature: domain Description: DUF4394 Location: 5607-5715 bp Feature: domain Description: DUF4394 Location: 5607-571 5 bp Feature: domain Description: DUF4394 Location: 5952-6051 bp Feature: domain Description: DUF4394 Location: 5952-6051 bp Feature: gene Location: 6402-6599 bp Feature: gene Location: 7527-8459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7782-8412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7782-841 2 bp Feature: gene Location: 9248-9889 bp Feature: domain Description: KOG1591 Location: 9353-9881 bp Feature: domain Description: KOG1 591 Location: 9353-9881 bp Feature: gene Location: 10361-10552 bp Feature: gene Location: 296935-297279 bp Feature: domain Description: rpsF Location: 296995-297274 bp Feature: domain Description: rpsF Location: 296995-297274 bp Feature: gene Location: 297592-298692 bp Feature: domain Description: PRK09601 Location: 297595-298690 bp Feature: domain Description: PRK09601 Location: 297595-298690 bp Feature: gene Location: 298911-300185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 299112-299727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2991 1 2-299727 bp Feature: domain Description: GIIM Note: maturase Location: 299787-299997 bp Feature: domain Description: GIIM Note: maturase Location: 299787-299997 bp Feature: gene Location: 300713-302710 bp Feature: domain Description: MopB_3 Location: 300734-302303 bp Feature: domain Description: MopB_3 Location: 300734-302303 bp Feature: domain Description: DMSO_red_II_alp Location: 302348-302591 bp Feature: domain Description: DMSO_red_II_alp Location: 302348-302591 bp Feature: gene Location: 302786-302983 bp Feature: domain Description: COG4481 Location: 302795-302966 bp Feature: domain Description: COG4481 Location: 302795-302966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMZU01000032.1 (2268 bp)
Overview 1 RT 1: 520-2196 bp Neighborhood of RT #1 [520, 2196] RVT-GII GIIM Feature: gene Location: 520-1848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775-1468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775-1468 bp Feature: domain Description: GIIM Note: maturase Location: 1552-1756 bp Feature: domain Description: GIIM Note: maturase Location: 1552 -1756 bp Feature: gene Location: 2068-2196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMZU01000020.1 (69289 bp)
Overview 1 RT 1: 35110-40728 bp Neighborhood of RT #1 [35110, 40728] ElsH FadB RVT-Retrons Feature: gene Location: 35110-35973 bp Feature: domain Description: ElsH Location: 35233-35941 bp Feature: domain Description: ElsH Location: 3 523 3 -3 5941 bp Feature: gene Location: 36047-36982 bp Feature: domain Description: FadB Location: 36056-36944 bp Feature: domain Description: FadB Location: 3 6056-3 6944 bp Feature: gene Location: 38190-39266 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38475-39024 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 8475-3 9024 bp Feature: gene Location: 39390-39713 bp Feature: gene Location: 39706-40728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SMZU01000002.1 (700174 bp)
Overview 1 RT 1: 166187-173876 bp Neighborhood of RT #1 [166187, 173876] PRK00024 RVT-GII Intron_maturas2 HNHc Peptidases_S8_BacillopeptidaseF-like Peptidase_M6 CarboxypepD_reg CarboxypepD_reg Feature: gene Location: 166187-166465 bp Feature: domain Description: PRK00024 Location: 166214-166460 bp Feature: domain Description: PRK00024 Location: 166214 -1664 60 bp Feature: gene Location: 166733-166888 bp Feature: gene Location: 167018-168829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167282-168113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 167282-168113 bp Feature: domain Description: Intron_maturas2 Location: 168194-168578 bp Feature: domain Description: Intron_maturas2 Location: 168194 -168578 bp Feature: domain Description: HNHc Note: nucleases Location: 168632-168800 bp Feature: domain Description: HNHc Note: nucleases Location: 168632-168800 bp Feature: gene Location: 169923-173360 bp Feature: domain Description: Peptidases_S8_BacillopeptidaseF-like Location: 170535-171309 bp Feature: domain Description: Peptidases_S8_BacillopeptidaseF-like Location: 170535-171309 bp Feature: domain Description: Peptidase_M6 Location: 172101-172335 bp Feature: domain Description: Peptidase_M6 Location: 172101-172335 bp Feature: domain Description: CarboxypepD_reg Location: 172464-172593 bp Feature: domain Description: CarboxypepD_reg Location: 1724 64 -172593 bp Feature: domain Description: CarboxypepD_reg Location: 172617-172845 bp Feature: domain Description: CarboxypepD_reg Location: 172617-17284 5 bp Feature: gene Location: 173637-173876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT