myRT

myRT report for GCA_004362065.1_ASM436206v1

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Seq: SNXF01000026.1 (30859 bp)
Overview 1 RT 1: 17888-27202 bp Neighborhood of RT #1 [17888, 27231] COG1743 PLDc_N_DEXD_a DEXDc_RapA PRK04914 RVT-UG5 DUF4357 Feature: gene Location: 17888-20809 bp Feature: domain Description: COG1743 Location: 17906-20210 bp Feature: domain Description: COG1 743 Location: 1 7906-2021 0 bp Feature: gene Location: 20820-23501 bp Feature: domain Description: PLDc_N_DEXD_a Location: 20832-21348 bp Feature: domain Description: PLDc_N_DEXD_a Location: 20832-21 348 bp Feature: domain Description: DEXDc_RapA Location: 21513-22221 bp Feature: domain Description: DEXDc_RapA Location: 21 51 3-22221 bp Feature: domain Description: PRK04914 Location: 23058-23259 bp Feature: domain Description: PRK0491 4 Location: 23058-23259 bp Feature: gene Location: 23544-26738 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24045-24561 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24045-24561 bp Feature: gene Location: 26763-26960 bp Feature: gene Location: 26992-27231 bp Feature: domain Description: DUF4357 Location: 27043-27202 bp Feature: domain Description: DUF4357 Location: 27043-27202 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: SNXF01000008.1 (95161 bp)
Overview 1 RT 1: 19612-26733 bp Neighborhood of RT #1 [19612, 26822] ligA pcrA RVT-GII Intron_maturas2 HNHc pcrA GIY-YIG_COG1833 Feature: gene Location: 19612-21627 bp Feature: domain Description: ligA Location: 19630-21610 bp Feature: domain Description: ligA Location: 19630-2 1610 bp Feature: gene Location: 21640-22917 bp Feature: domain Description: pcrA Location: 21646-22909 bp Feature: domain Description: pcrA Location: 2 1646-2 2 909 bp Feature: gene Location: 23142-24986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23406-24243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3406-2 42 43 bp Feature: domain Description: Intron_maturas2 Location: 24312-24678 bp Feature: domain Description: Intron_maturas2 Location: 2 4312 -2 4678 bp Feature: domain Description: HNHc Note: nucleases Location: 24798-24957 bp Feature: domain Description: HNHc Note: nucleases Location: 2 4798-2 4957 bp Feature: gene Location: 25575-26348 bp Feature: domain Description: pcrA Location: 25596-26337 bp Feature: domain Description: pcrA Location: 2 5596-2 6337 bp Feature: gene Location: 26379-26822 bp Feature: domain Description: GIY-YIG_COG1833 Location: 26403-26733 bp Feature: domain Description: GIY-YIG_COG1833 Location: 2 6403-2 6733 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: SNXF01000064.1 (1077 bp)
Overview 1 RT 1: 5-992 bp Neighborhood of RT #1 [5, 1075] RVT-GII GIIM Feature: gene Location: 5-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 134-755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 4-755 bp Feature: domain Description: GIIM Note: maturase Location: 800-992 bp Feature: domain Description: GIIM Note: maturase Location: 800-992 bp Sorry, your browser does not support inline SVG.
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