myRT

myRT report for GCA_004363145.1_ASM436314v1

Download annotations/find similar RTs

Seq: SNYX01000005.1 (541738 bp)
Overview 1 RT 1: 2043-5998 bp 2 RT 2: 109705-115099 bp 3 RT 3: 239920-243906 bp 4 RT 4: 371055-375389 bp 5 RT 5: 459735-464372 bp Neighborhood of RT #1 [2043, 6198] DDE_3 RVT_N RVT-GII GIIM HNH DUF2971 Neighborhood of RT #2 [109705, 115119] PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII GIIM PHA02517 PRK10525 Neighborhood of RT #3 [239920, 243944] Rve RVT-GII GIIM RVT-GII InsE PHA02517 Neighborhood of RT #4 [371055, 375397] COG3547 RVT-GII COG3293 Neighborhood of RT #5 [459735, 464372] DDE_5 RVT-Retrons HipB Feature: gene Location: 2043-2696 bp Feature: domain Description: DDE_3 Location: 2202-2607 bp Feature: domain Description: DDE_3 Location: 2202-2607 bp Feature: gene Location: 2711-2878 bp Feature: gene Location: 3002-4639 bp Feature: domain Description: RVT_N Location: 3047-3290 bp Feature: domain Description: RVT_N Location: 3047-3290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3335-3971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3335-3971 bp Feature: domain Description: GIIM Note: maturase Location: 4022-4256 bp Feature: domain Description: GIIM Note: maturase Location: 4022-4256 bp Feature: domain Description: HNH Note: nucleases Location: 4508-4631 bp Feature: domain Description: HNH Note: nucleases Location: 4508-4631 bp Feature: gene Location: 5076-5486 bp Feature: gene Location: 5557-6198 bp Feature: domain Description: DUF2971 Location: 5761-5998 bp Feature: domain Description: DUF2971 Location: 5761 -5998 bp Feature: gene Location: 109705-111924 bp Feature: domain Description: PinE Location: 109753-110341 bp Feature: domain Description: PinE Location: 1 09753-1 1 0341 bp Feature: domain Description: Zn_ribbon_recom Location: 110707-110875 bp Feature: domain Description: Zn_ribbon_recom Location: 1 1 0707-1 1 0875 bp Feature: domain Description: HTH_17 Location: 111586-111709 bp Feature: domain Description: HTH_1 7 Location: 1 1 1 586-1 1 1 709 bp Feature: domain Description: HTH_17 Location: 111769-111883 bp Feature: domain Description: HTH_1 7 Location: 1 1 1 769-1 1 1 883 bp Feature: gene Location: 111924-112322 bp Feature: gene Location: 112394-113419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112406-112898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2406-1 1 2898 bp Feature: domain Description: GIIM Note: maturase Location: 112994-113171 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 2994-1 1 31 71 bp Feature: gene Location: 113542-113958 bp Feature: domain Description: PHA02517 Location: 113545-113950 bp Feature: domain Description: PHA0251 7 Location: 1 1 3545-1 1 3950 bp Feature: gene Location: 114217-115119 bp Feature: domain Description: PRK10525 Location: 114277-115099 bp Feature: domain Description: PRK1 0525 Location: 1 1 4277-1 1 5099 bp Feature: gene Location: 239920-240081 bp Feature: gene Location: 240217-240732 bp Feature: domain Description: Rve Location: 240250-240640 bp Feature: domain Description: Rve Location: 240250-240640 bp Feature: gene Location: 240785-242038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240998-241652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240998-241 652 bp Feature: domain Description: GIIM Note: maturase Location: 241733-241955 bp Feature: domain Description: GIIM Note: maturase Location: 241 733-241 955 bp Feature: gene Location: 242272-242898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242323-242542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242323-242542 bp Feature: gene Location: 242944-243267 bp Feature: domain Description: InsE Location: 242983-243262 bp Feature: domain Description: InsE Location: 242983-243262 bp Feature: gene Location: 243264-243944 bp Feature: domain Description: PHA02517 Location: 243333-243906 bp Feature: domain Description: PHA0251 7 Location: 243333-243906 bp Feature: gene Location: 371055-372209 bp Feature: domain Description: COG3547 Location: 371283-372162 bp Feature: domain Description: COG3547 Location: 371 283-3721 62 bp Feature: gene Location: 372662-372970 bp Feature: gene Location: 373212-374732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373683-374376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373683-374376 bp Feature: gene Location: 374814-374954 bp Feature: gene Location: 375011-375397 bp Feature: domain Description: COG3293 Location: 375020-375389 bp Feature: domain Description: COG3293 Location: 375020-375389 bp Feature: gene Location: 459735-461135 bp Feature: domain Description: DDE_5 Location: 459783-460503 bp Feature: domain Description: DDE_5 Location: 459783-460503 bp Feature: gene Location: 461263-461403 bp Feature: gene Location: 461496-462497 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 461700-462234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 461 700-462234 bp Feature: gene Location: 462478-462783 bp Feature: domain Description: HipB Location: 462487-462766 bp Feature: domain Description: HipB Location: 462487-462766 bp Feature: gene Location: 463440-464372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DUF2971 (pfam11185), PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), PHA02517 (putative transposase OrfB; Reviewed)
PRK10525 (cytochrome o ubiquinol oxidase subunit II; Provisional), Rve (COG3316), InsE (COG2963), COG3547 (Transposase ), COG3293 (Transposase ), DDE_5 (pfam13546), RVT-Retrons, HipB (COG1396)

Seq: SNYX01000002.1 (2518465 bp)
Overview 1 RT 1: 54275-61222 bp 2 RT 2: 95813-100427 bp 3 RT 3: 1655542-1660234 bp 4 RT 4: 1912895-1916076 bp Neighborhood of RT #1 [54275, 61299] PHA02517 PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII GIIM PHA02517 COG3547 Neighborhood of RT #2 [95813, 101035] YhcG HU RVT_N RVT-GII GIIM HNHc KfrA_N Neighborhood of RT #3 [1655542, 1660281] HTH_1 PBP2_NhaR RVT-GII GIIM oxa_formateAnti QdoI Neighborhood of RT #4 [1912895, 1916135] PRK09692 INT_P4_C RVT-GII Rve Feature: gene Location: 54275-54733 bp Feature: domain Description: PHA02517 Location: 54338-54698 bp Feature: domain Description: PHA02 517 Location: 54338-54698 bp Feature: gene Location: 55907-58129 bp Feature: domain Description: PinE Location: 55958-56546 bp Feature: domain Description: PinE Location: 55958-56546 bp Feature: domain Description: Zn_ribbon_recom Location: 56912-57080 bp Feature: domain Description: Zn_ribbon_recom Location: 56912 -57080 bp Feature: domain Description: HTH_17 Location: 57791-57914 bp Feature: domain Description: HTH_17 Location: 57791-57914 bp Feature: domain Description: HTH_17 Location: 57974-58088 bp Feature: domain Description: HTH_17 Location: 57974-58088 bp Feature: gene Location: 58596-59621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58608-59100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58608-59100 bp Feature: domain Description: GIIM Note: maturase Location: 59196-59373 bp Feature: domain Description: GIIM Note: maturase Location: 59196-59373 bp Feature: gene Location: 59738-60100 bp Feature: domain Description: PHA02517 Location: 59741-59912 bp Feature: domain Description: PHA02 517 Location: 59741-59912 bp Feature: gene Location: 60184-61299 bp Feature: domain Description: COG3547 Location: 60226-61222 bp Feature: domain Description: COG3547 Location: 602 2 6-612 2 2 bp Feature: gene Location: 95813-96640 bp Feature: domain Description: YhcG Location: 96263-96635 bp Feature: domain Description: YhcG Location: 962 63-96635 bp Feature: gene Location: 96637-96915 bp Feature: domain Description: HU Location: 96661-96901 bp Feature: domain Description: HU Location: 96661-96901 bp Feature: gene Location: 96979-98682 bp Feature: domain Description: RVT_N Location: 97033-97276 bp Feature: domain Description: RVT_N Location: 97033-972 76 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97321-97960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9732 1-97960 bp Feature: domain Description: GIIM Note: maturase Location: 98011-98245 bp Feature: domain Description: GIIM Note: maturase Location: 98011-982 45 bp Feature: domain Description: HNHc Note: nucleases Location: 98473-98629 bp Feature: domain Description: HNHc Note: nucleases Location: 98473-9862 9 bp Feature: gene Location: 99419-99643 bp Feature: gene Location: 99980-101035 bp Feature: domain Description: KfrA_N Location: 100097-100427 bp Feature: domain Description: KfrA_N Location: 100097-10042 7 bp Feature: gene Location: 1655542-1656435 bp Feature: domain Description: HTH_1 Location: 1655551-1655728 bp Feature: domain Description: HTH_1 Location: 1655551-165572 8 bp Feature: domain Description: PBP2_NhaR Location: 1655818-1656427 bp Feature: domain Description: PBP2 _NhaR Location: 1655818-165642 7 bp Feature: gene Location: 1656738-1656950 bp Feature: gene Location: 1656966-1658333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1657293-1657914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16572 93-1657914 bp Feature: domain Description: GIIM Note: maturase Location: 1657968-1658175 bp Feature: domain Description: GIIM Note: maturase Location: 1657968-1658175 bp Feature: gene Location: 1658566-1659930 bp Feature: domain Description: oxa_formateAnti Location: 1658674-1659886 bp Feature: domain Description: oxa_formateAnti Location: 1658674-1659886 bp Feature: gene Location: 1660015-1660281 bp Feature: domain Description: QdoI Location: 1660072-1660234 bp Feature: domain Description: QdoI Location: 1660072 -16602 34 bp Feature: gene Location: 1912895-1913755 bp Feature: domain Description: PRK09692 Location: 1912910-1913753 bp Feature: domain Description: PRK09692 Location: 1912 910-1913753 bp Feature: gene Location: 1913813-1914265 bp Feature: domain Description: INT_P4_C Location: 1913825-1914206 bp Feature: domain Description: INT_P4_C Location: 191382 5-19142 06 bp Feature: gene Location: 1914360-1914860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914567-1914750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914567-1914750 bp Feature: gene Location: 1915209-1915568 bp Feature: gene Location: 1915416-1916135 bp Feature: domain Description: Rve Location: 1915458-1916076 bp Feature: domain Description: Rve Location: 1915458-1916076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), YhcG (COG4804), HU (cd13831), RVT_N (pfam13655)
HNHc (smart00507), KfrA_N (pfam11740), HTH_1 (pfam00126), PBP2_NhaR (cd08429), oxa_formateAnti (TIGR04259), QdoI (COG1917), PRK09692 (Integrase; provisional), INT_P4_C (cd00801), Rve (COG3316)

Seq: SNYX01000003.1 (2716837 bp)
Overview 1 RT 1: 241822-245121 bp 2 RT 2: 627091-632617 bp 3 RT 3: 851389-857486 bp 4 RT 4: 1890476-1894929 bp Neighborhood of RT #1 [241822, 245121] PRK06761 RVT-GII Neighborhood of RT #2 [627091, 632617] DDE_5 PHA02517 RVT-GII GIIM PinE Zn_ribbon_recom HTH_17 HTH_17 Neighborhood of RT #3 [851389, 857486] PnbA PHA02517 RVT-GII GIIM PinE Zn_ribbon_recom HTH_17 HTH_17 Neighborhood of RT #4 [1890476, 1894929] MFS_MefA_like PHA02517 RVT-GII GIIM InsE Feature: gene Location: 241822-242313 bp Feature: gene Location: 242422-242736 bp Feature: domain Description: PRK06761 Location: 242431-242719 bp Feature: domain Description: PRK06761 Location: 24243 1-242719 bp Feature: gene Location: 243020-244540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243491-244184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243 491-244184 bp Feature: gene Location: 244564-244932 bp Feature: gene Location: 244951-245121 bp Feature: gene Location: 627091-628074 bp Feature: domain Description: DDE_5 Location: 627139-627859 bp Feature: domain Description: DDE_5 Location: 62713 9-627859 bp Feature: gene Location: 628113-628508 bp Feature: domain Description: PHA02517 Location: 628125-628506 bp Feature: domain Description: PHA02517 Location: 628125-628506 bp Feature: gene Location: 628673-629698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 628685-629177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 628685-629177 bp Feature: domain Description: GIIM Note: maturase Location: 629273-629450 bp Feature: domain Description: GIIM Note: maturase Location: 629273 -629450 bp Feature: gene Location: 630165-632387 bp Feature: domain Description: PinE Location: 630216-630804 bp Feature: domain Description: PinE Location: 63 0216-63 0804 bp Feature: domain Description: Zn_ribbon_recom Location: 631170-631338 bp Feature: domain Description: Zn_ribbon_recom Location: 63 1170-63 13 3 8 bp Feature: domain Description: HTH_17 Location: 632049-632172 bp Feature: domain Description: HTH_17 Location: 63 2049-63 2172 bp Feature: domain Description: HTH_17 Location: 632232-632346 bp Feature: domain Description: HTH_17 Location: 63 223 2-63 23 46 bp Feature: gene Location: 632462-632617 bp Feature: gene Location: 851389-852975 bp Feature: domain Description: PnbA Location: 851500-852940 bp Feature: domain Description: PnbA Location: 851500-852940 bp Feature: gene Location: 852982-853377 bp Feature: domain Description: PHA02517 Location: 852994-853375 bp Feature: domain Description: PHA02517 Location: 852994-853 3 75 bp Feature: gene Location: 853542-854567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853554-854046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853 554-854046 bp Feature: domain Description: GIIM Note: maturase Location: 854142-854319 bp Feature: domain Description: GIIM Note: maturase Location: 854142-8543 19 bp Feature: gene Location: 855034-857256 bp Feature: domain Description: PinE Location: 855085-855673 bp Feature: domain Description: PinE Location: 855085-855673 bp Feature: domain Description: Zn_ribbon_recom Location: 856039-856207 bp Feature: domain Description: Zn_ribbon_recom Location: 85603 9-856207 bp Feature: domain Description: HTH_17 Location: 856918-857041 bp Feature: domain Description: HTH_17 Location: 856918-857041 bp Feature: domain Description: HTH_17 Location: 857101-857215 bp Feature: domain Description: HTH_17 Location: 857101-857215 bp Feature: gene Location: 857331-857486 bp Feature: gene Location: 1890476-1891606 bp Feature: domain Description: MFS_MefA_like Location: 1890521-1891499 bp Feature: domain Description: MFS_MefA_like Location: 1890521-1891499 bp Feature: gene Location: 1891618-1892508 bp Feature: domain Description: PHA02517 Location: 1891684-1892473 bp Feature: domain Description: PHA02517 Location: 1891684-1892473 bp Feature: gene Location: 1892605-1893855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1892809-1893469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1892809-1893 469 bp Feature: domain Description: GIIM Note: maturase Location: 1893550-1893781 bp Feature: domain Description: GIIM Note: maturase Location: 1893 550-1893 781 bp Feature: gene Location: 1894358-1894681 bp Feature: domain Description: InsE Location: 1894409-1894670 bp Feature: domain Description: InsE Location: 1894409-1894670 bp Feature: gene Location: 1894723-1894929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06761 (hypothetical protein; Provisional), RVT-GII, DDE_5 (pfam13546), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), PnbA (COG2272), MFS_MefA_like (cd06173)
InsE (COG2963)

Seq: SNYX01000004.1 (710816 bp)
Overview 1 RT 1: 528972-533317 bp Neighborhood of RT #1 [528972, 533317] mcbC-like_oxidoreductase RVT-GII GIIM PHA02517 Feature: gene Location: 528972-529427 bp Feature: domain Description: mcbC-like_oxidoreductase Location: 529110-529389 bp Feature: domain Description: mcbC-like_oxidoreductase Location: 529110-529389 bp Feature: gene Location: 529461-529754 bp Feature: gene Location: 530246-531496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 530450-531110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5304 50-531110 bp Feature: domain Description: GIIM Note: maturase Location: 531191-531422 bp Feature: domain Description: GIIM Note: maturase Location: 531191-5314 22 bp Feature: gene Location: 531593-532483 bp Feature: domain Description: PHA02517 Location: 531659-532448 bp Feature: domain Description: PHA02517 Location: 531659-5324 4 8 bp Feature: gene Location: 532658-533317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mcbC-like_oxidoreductase, RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: SNYX01000001.1 (4495530 bp)
Overview 1 RT 1: 161491-167965 bp 2 RT 2: 429675-435587 bp 3 RT 3: 882430-887059 bp 4 RT 4: 890626-893249 bp 5 RT 5: 1336667-1341528 bp 6 RT 6: 1350264-1356441 bp 7 RT 7: 1580284-1582317 bp 8 RT 8: 3096257-3100022 bp 9 RT 9: 3558380-3563726 bp 10 RT 10: 3567342-3572883 bp 11 RT 11: 3610760-3613683 bp Neighborhood of RT #1 [161491, 167965] DUF5372 PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII GIIM DEDD_Tnp_IS110 Transposase_20 Neighborhood of RT #2 [429675, 435587] HTH_Tnp_1 HTH_Tnp_1 HTH_23 Tra5 RVT-GII GIIM PinE Zn_ribbon_recom HTH_17 HTH_17 Neighborhood of RT #3 [882430, 887059] DUF4096 RVT-GII GIIM Recombinase Zn_ribbon_recom Neighborhood of RT #4 [890626, 893263] RVT-GII Tra8 Neighborhood of RT #5 [1336667, 1341572] DDE_3 RVT_N RVT-GII GIIM HNH Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 Neighborhood of RT #6 [1350264, 1356441] PHA02517 PinE Zn_ribbon_recom HTH_17 HTH_17 RVT-GII GIIM PHA02517 Neighborhood of RT #7 [1580284, 1582317] COG1669 RVT-GII GIIM RVT-GII Neighborhood of RT #8 [3096257, 3100024] PRK10738 RVT-GII GIIM rplM rpsI Neighborhood of RT #9 [3558380, 3563767] PRK10818 PRK13989 RVT-GII PinE Zn_ribbon_recom HTH_17 HTH_17 Neighborhood of RT #10 [3567342, 3572888] Phage_int_SAM_1 INT_RitA_C_like Recombinase Zn_ribbon_recom RVT-GII GIIM RVT-GII GIIM HTH_23 HTH_33 DDE_3 Neighborhood of RT #11 [3610760, 3613718] DUF5372 RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 161491-162018 bp Feature: domain Description: DUF5372 Location: 161749-161980 bp Feature: domain Description: DUF5 372 Location: 161749-161980 bp Feature: gene Location: 162035-164257 bp Feature: domain Description: PinE Location: 162086-162674 bp Feature: domain Description: PinE Location: 162086-162674 bp Feature: domain Description: Zn_ribbon_recom Location: 163040-163208 bp Feature: domain Description: Zn_ribbon_recom Location: 163040-163208 bp Feature: domain Description: HTH_17 Location: 163919-164042 bp Feature: domain Description: HTH_17 Location: 163919-164042 bp Feature: domain Description: HTH_17 Location: 164102-164216 bp Feature: domain Description: HTH_17 Location: 164102-164216 bp Feature: gene Location: 164760-165527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164769-165171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164769-165 171 bp Feature: domain Description: GIIM Note: maturase Location: 165240-165456 bp Feature: domain Description: GIIM Note: maturase Location: 165 240-165 45 6 bp Feature: gene Location: 165964-167220 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 166003-166468 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 166003-166468 bp Feature: domain Description: Transposase_20 Location: 166795-167047 bp Feature: domain Description: Transposase_20 Location: 166795 -167047 bp Feature: gene Location: 167573-167965 bp Feature: gene Location: 429675-430172 bp Feature: domain Description: HTH_Tnp_1 Location: 429678-429816 bp Feature: domain Description: HTH_Tnp_1 Location: 429678-429816 bp Feature: domain Description: HTH_Tnp_1 Location: 429858-430089 bp Feature: domain Description: HTH_Tnp_1 Location: 42985 8-430089 bp Feature: gene Location: 430172-431251 bp Feature: domain Description: HTH_23 Location: 430226-430298 bp Feature: domain Description: HTH_23 Location: 430226-430298 bp Feature: domain Description: Tra5 Location: 430409-431063 bp Feature: domain Description: Tra5 Location: 430409-431063 bp Feature: gene Location: 431331-432173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431343-431775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431343-431775 bp Feature: domain Description: GIIM Note: maturase Location: 431853-432081 bp Feature: domain Description: GIIM Note: maturase Location: 43185 3-432081 bp Feature: gene Location: 432640-434862 bp Feature: domain Description: PinE Location: 432691-433279 bp Feature: domain Description: PinE Location: 432691-433279 bp Feature: domain Description: Zn_ribbon_recom Location: 433645-433813 bp Feature: domain Description: Zn_ribbon_recom Location: 433645 -433813 bp Feature: domain Description: HTH_17 Location: 434524-434647 bp Feature: domain Description: HTH_17 Location: 4345 24-434647 bp Feature: domain Description: HTH_17 Location: 434707-434821 bp Feature: domain Description: HTH_17 Location: 434707-434821 bp Feature: gene Location: 435342-435587 bp Feature: gene Location: 882430-883158 bp Feature: gene Location: 883410-884339 bp Feature: domain Description: DUF4096 Location: 883428-883656 bp Feature: domain Description: DUF4096 Location: 883428-88365 6 bp Feature: gene Location: 884841-885533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884874-885114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884874-885 114 bp Feature: domain Description: GIIM Note: maturase Location: 885165-885369 bp Feature: domain Description: GIIM Note: maturase Location: 885 165 -885 369 bp Feature: gene Location: 885466-886704 bp Feature: domain Description: Recombinase Location: 885547-885910 bp Feature: domain Description: Recombinase Location: 885 5 47-885 910 bp Feature: domain Description: Zn_ribbon_recom Location: 885949-886138 bp Feature: domain Description: Zn_ribbon_recom Location: 885 949-886138 bp Feature: gene Location: 886829-887059 bp Feature: gene Location: 890626-890901 bp Feature: gene Location: 890894-891223 bp Feature: gene Location: 891288-891986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 891558-891972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8915 5 8-891972 bp Feature: gene Location: 892734-892886 bp Feature: gene Location: 892940-893263 bp Feature: domain Description: Tra8 Location: 892946-893249 bp Feature: domain Description: Tra8 Location: 892946-893249 bp Feature: gene Location: 1336667-1337320 bp Feature: domain Description: DDE_3 Location: 1336826-1337231 bp Feature: domain Description: DDE_3 Location: 1336826-1337231 bp Feature: gene Location: 1337335-1337502 bp Feature: gene Location: 1337626-1339263 bp Feature: domain Description: RVT_N Location: 1337671-1337914 bp Feature: domain Description: RVT_N Location: 1337671-1337914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1337959-1338595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133795 9-13385 95 bp Feature: domain Description: GIIM Note: maturase Location: 1338646-1338880 bp Feature: domain Description: GIIM Note: maturase Location: 1338646-1338880 bp Feature: domain Description: HNH Note: nucleases Location: 1339132-1339255 bp Feature: domain Description: HNH Note: nucleases Location: 1339132-133925 5 bp Feature: gene Location: 1339766-1340077 bp Feature: gene Location: 1340241-1341572 bp Feature: domain Description: Tnp_DNA_bind Location: 1340262-1340433 bp Feature: domain Description: Tnp_DNA_bind Location: 1340262-1340433 bp Feature: domain Description: DDE_Tnp_1 Location: 1341138-1341285 bp Feature: domain Description: DDE_Tnp_1 Location: 1341138-1341285 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1341285-1341528 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1341285 -13415 28 bp Feature: gene Location: 1350264-1350722 bp Feature: domain Description: PHA02517 Location: 1350330-1350693 bp Feature: domain Description: PHA025 17 Location: 135 0330-135 0693 bp Feature: gene Location: 1351896-1354118 bp Feature: domain Description: PinE Location: 1351947-1352535 bp Feature: domain Description: PinE Location: 135 1947-135 25 35 bp Feature: domain Description: Zn_ribbon_recom Location: 1352901-1353069 bp Feature: domain Description: Zn_ribbon_recom Location: 135 2901-135 3069 bp Feature: domain Description: HTH_17 Location: 1353780-1353903 bp Feature: domain Description: HTH_17 Location: 135 3780-135 3903 bp Feature: domain Description: HTH_17 Location: 1353963-1354077 bp Feature: domain Description: HTH_17 Location: 135 3963-135 4077 bp Feature: gene Location: 1354585-1355610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1354597-1355089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135 45 97-135 5 089 bp Feature: domain Description: GIIM Note: maturase Location: 1355185-1355362 bp Feature: domain Description: GIIM Note: maturase Location: 135 5 185 -135 5 362 bp Feature: gene Location: 1355775-1356170 bp Feature: domain Description: PHA02517 Location: 1355787-1356168 bp Feature: domain Description: PHA025 17 Location: 135 5 787-135 6168 bp Feature: gene Location: 1356250-1356441 bp Feature: gene Location: 1580284-1580457 bp Feature: gene Location: 1580604-1580786 bp Feature: domain Description: COG1669 Location: 1580622-1580781 bp Feature: domain Description: COG1669 Location: 15 80622-15 80781 bp Feature: gene Location: 1580844-1581365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1580850-1580931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 8085 0-15 80931 bp Feature: domain Description: GIIM Note: maturase Location: 1581000-1581216 bp Feature: domain Description: GIIM Note: maturase Location: 15 81000-15 81216 bp Feature: gene Location: 1581381-1581602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1581447-1581594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 81447-15 815 94 bp Feature: gene Location: 1581696-1581899 bp Feature: gene Location: 1582042-1582317 bp Feature: gene Location: 3096257-3096658 bp Feature: domain Description: PRK10738 Location: 3096269-3096653 bp Feature: domain Description: PRK10738 Location: 3096269-309665 3 bp Feature: gene Location: 3097284-3097496 bp Feature: gene Location: 3097512-3098879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3097839-3098460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3097839-3098460 bp Feature: domain Description: GIIM Note: maturase Location: 3098514-3098721 bp Feature: domain Description: GIIM Note: maturase Location: 30985 14-3098721 bp Feature: gene Location: 3099093-3099620 bp Feature: domain Description: rplM Location: 3099195-3099618 bp Feature: domain Description: rplM Location: 3099195 -3099618 bp Feature: gene Location: 3099632-3100024 bp Feature: domain Description: rpsI Location: 3099644-3100022 bp Feature: domain Description: rpsI Location: 3099644-3100022 bp Feature: gene Location: 3558380-3559195 bp Feature: domain Description: PRK10818 Location: 3558383-3559187 bp Feature: domain Description: PRK10818 Location: 35 5 8383-35 5 9187 bp Feature: gene Location: 3559205-3559459 bp Feature: domain Description: PRK13989 Location: 3559208-3559454 bp Feature: domain Description: PRK13989 Location: 35 5 9208-35 5 945 4 bp Feature: gene Location: 3559959-3560492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3560289-3560394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 60289-35 60394 bp Feature: gene Location: 3561066-3561488 bp Feature: gene Location: 3561545-3563767 bp Feature: domain Description: PinE Location: 3561596-3562184 bp Feature: domain Description: PinE Location: 35 615 96-35 62184 bp Feature: domain Description: Zn_ribbon_recom Location: 3562550-3562718 bp Feature: domain Description: Zn_ribbon_recom Location: 35 625 5 0-35 62718 bp Feature: domain Description: HTH_17 Location: 3563429-3563552 bp Feature: domain Description: HTH_17 Location: 35 63429-35 635 5 2 bp Feature: domain Description: HTH_17 Location: 3563612-3563726 bp Feature: domain Description: HTH_17 Location: 35 63612-35 63726 bp Feature: gene Location: 3567342-3568580 bp Feature: domain Description: Phage_int_SAM_1 Location: 3567738-3567939 bp Feature: domain Description: Phage_int_SAM_1 Location: 35 67738-35 67939 bp Feature: domain Description: INT_RitA_C_like Location: 3568035-3568551 bp Feature: domain Description: INT_RitA_C_like Location: 35 68035 -35 685 5 1 bp Feature: gene Location: 3568883-3570277 bp Feature: domain Description: Recombinase Location: 3569108-3569471 bp Feature: domain Description: Recombinase Location: 35 69108-35 69471 bp Feature: domain Description: Zn_ribbon_recom Location: 3569510-3569699 bp Feature: domain Description: Zn_ribbon_recom Location: 35 695 10-35 69699 bp Feature: gene Location: 3570198-3570818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3570231-3570537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 70231-35 705 37 bp Feature: domain Description: GIIM Note: maturase Location: 3570606-3570804 bp Feature: domain Description: GIIM Note: maturase Location: 35 70606-35 70804 bp Feature: gene Location: 3570629-3571798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3570992-3571379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 70992-35 71379 bp Feature: domain Description: GIIM Note: maturase Location: 3571430-3571634 bp Feature: domain Description: GIIM Note: maturase Location: 35 71430-35 71634 bp Feature: gene Location: 3571990-3572535 bp Feature: domain Description: HTH_23 Location: 3572065-3572182 bp Feature: domain Description: HTH_23 Location: 35 72065 -35 72182 bp Feature: domain Description: HTH_33 Location: 3572326-3572476 bp Feature: domain Description: HTH_33 Location: 35 72326-35 72476 bp Feature: gene Location: 3572535-3572888 bp Feature: domain Description: DDE_3 Location: 3572541-3572883 bp Feature: domain Description: DDE_3 Location: 35 725 41-35 72883 bp Feature: gene Location: 3610760-3611092 bp Feature: gene Location: 3611145-3611507 bp Feature: domain Description: DUF5372 Location: 3611238-3611469 bp Feature: domain Description: DUF5 372 Location: 3611238-3611469 bp Feature: gene Location: 3611495-3612379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3611501-3612098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36115 01-3612098 bp Feature: domain Description: GIIM Note: maturase Location: 3612167-3612305 bp Feature: domain Description: GIIM Note: maturase Location: 3612167-3612305 bp Feature: gene Location: 3612590-3613585 bp Feature: domain Description: Phage_int_SAM_1 Location: 3612638-3612878 bp Feature: domain Description: Phage_int_SAM_1 Location: 3612638-3612878 bp Feature: domain Description: INT_RitC_C_like Location: 3612971-3613505 bp Feature: domain Description: INT_RitC_C_like Location: 3612971-36135 05 bp Feature: gene Location: 3613578-3613718 bp Feature: domain Description: INT_RitB_C_like Location: 3613584-3613683 bp Feature: domain Description: INT_RitB_C_like Location: 36135 84-3613683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5372 (pfam17342), PinE (COG1961), Zn_ribbon_recom (pfam13408), HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371), HTH_Tnp_1 (pfam01527), HTH_23 (pfam13384)
Tra5 (COG2801), DUF4096 (pfam13340), Recombinase (pfam07508), Tra8 (COG2826), DDE_3 (pfam13358), RVT_N (pfam13655), HNH (pfam01844), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281)
PHA02517 (putative transposase OrfB; Reviewed), COG1669 (Predicted nucleotidyltransferase ), PRK10738 (OsmC family protein), rplM (PRK09216), rpsI (PRK00132), PRK10818 (septum site-determining protein MinD), PRK13989 (cell division topological specificity factor MinE; Provisional), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), HTH_33 (pfam13592)
INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797)