myRT

myRT report for GCA_004364445.1_ASM436444v1

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Seq: SOCZ01000003.1 (465384 bp)
Overview 1 RT 1: 393754-397825 bp Neighborhood of RT #1 [393754, 397962] PBP2_TRAP_Dctp3_4 RVT-GII RVT-GII HTH_Tnp_1 HTH_21 rve Feature: gene Location: 393754-394890 bp Feature: domain Description: PBP2_TRAP_Dctp3_4 Location: 393961-394831 bp Feature: domain Description: PBP2_TRAP_Dctp3_4 Location: 393961 -394831 bp Feature: gene Location: 395320-395520 bp Feature: gene Location: 395645-396205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395882-396155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395882-3961 55 bp Feature: gene Location: 396284-396700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396290-396521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396290-396521 bp Feature: gene Location: 396875-397141 bp Feature: domain Description: HTH_Tnp_1 Location: 396881-397088 bp Feature: domain Description: HTH_Tnp_1 Location: 396881 -397088 bp Feature: gene Location: 397162-397962 bp Feature: domain Description: HTH_21 Location: 397324-397438 bp Feature: domain Description: HTH_21 Location: 397324-397438 bp Feature: domain Description: rve Location: 397489-397825 bp Feature: domain Description: rve Location: 397489-397825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_TRAP_Dctp3_4 (cd13665), RVT-GII, HTH_Tnp_1 (pfam01527), HTH_21 (pfam13276), rve (pfam00665)

Seq: SOCZ01000001.1 (609957 bp)
Overview 1 RT 1: 38897-43055 bp 2 RT 2: 516903-527792 bp Neighborhood of RT #1 [38897, 43087] RVT-Retrons IS5 DDE_3 Neighborhood of RT #2 [516903, 527845] EamA COG2343 RVT-UG8 recD recB Feature: gene Location: 38897-39061 bp Feature: gene Location: 39146-40210 bp Feature: gene Location: 40219-41163 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40327-40900 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4032 7-40900 bp Feature: gene Location: 41235-42179 bp Feature: domain Description: IS5 Location: 41424-42153 bp Feature: domain Description: IS5 Location: 4142 4-42 153 bp Feature: gene Location: 42716-43087 bp Feature: domain Description: DDE_3 Location: 42764-43055 bp Feature: domain Description: DDE_3 Location: 42 764-43055 bp Feature: gene Location: 516903-517325 bp Feature: domain Description: EamA Location: 516915-517296 bp Feature: domain Description: EamA Location: 516915-5172 96 bp Feature: gene Location: 517475-517783 bp Feature: domain Description: COG2343 Location: 517493-517778 bp Feature: domain Description: COG2 343 Location: 517493-517778 bp Feature: gene Location: 519279-521354 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 519885-520350 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 519885-52 0350 bp Feature: gene Location: 521562-523907 bp Feature: domain Description: recD Location: 521709-523896 bp Feature: domain Description: recD Location: 52 1709-52 3896 bp Feature: gene Location: 523928-527845 bp Feature: domain Description: recB Location: 523949-527792 bp Feature: domain Description: recB Location: 52 3949-52 7792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, IS5 (COG3039), DDE_3 (pfam13358), EamA (pfam00892), COG2343 (Uncharacterized conserved protein, DUF427 family ), RVT-UG8, recD (TIGR01447), recB (TIGR00609)