myRT

myRT report for GCA_004365015.1_ASM436501v1

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Seq: SOBU01000006.1 (377705 bp)
Overview 1 RT 1: 7993-11293 bp Neighborhood of RT #1 [7993, 11472] RVT-GII HTH_Tnp_1 Feature: gene Location: 7993-8439 bp Feature: gene Location: 8440-8862 bp Feature: gene Location: 9198-10628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9558-10251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9558-1 0251 bp Feature: gene Location: 10733-10942 bp Feature: gene Location: 11119-11472 bp Feature: domain Description: HTH_Tnp_1 Location: 11128-11293 bp Feature: domain Description: HTH_Tnp_1 Location: 1 1 1 28-1 1 293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SOBU01000001.1 (2275215 bp)
Overview 1 RT 1: 487153-492661 bp Neighborhood of RT #1 [487153, 492675] OmpV RVT_N RVT-GII GIIM HNHc PRK09956 YeaD Feature: gene Location: 487153-487905 bp Feature: domain Description: OmpV Location: 487174-487903 bp Feature: domain Description: OmpV Location: 487174-487903 bp Feature: gene Location: 488286-488474 bp Feature: gene Location: 488787-490502 bp Feature: domain Description: RVT_N Location: 488841-489084 bp Feature: domain Description: RVT_N Location: 488841-489084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489129-489780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48912 9-489780 bp Feature: domain Description: GIIM Note: maturase Location: 489831-490065 bp Feature: domain Description: GIIM Note: maturase Location: 489831-490065 bp Feature: domain Description: HNHc Note: nucleases Location: 490296-490443 bp Feature: domain Description: HNHc Note: nucleases Location: 4902 96-490443 bp Feature: gene Location: 490522-491490 bp Feature: domain Description: PRK09956 Location: 490591-491476 bp Feature: domain Description: PRK09956 Location: 490591-491476 bp Feature: gene Location: 491797-492675 bp Feature: domain Description: YeaD Location: 491809-492661 bp Feature: domain Description: YeaD Location: 491809-492 661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SOBU01000009.1 (197100 bp)
Overview 1 RT 1: 137979-145121 bp Neighborhood of RT #1 [137979, 145121] PRK14985 malQ RVT-GII Feature: gene Location: 137979-140387 bp Feature: domain Description: PRK14985 Location: 137988-140385 bp Feature: domain Description: PRK14985 Location: 13 7988-1403 85 bp Feature: gene Location: 140397-142484 bp Feature: domain Description: malQ Location: 140400-142467 bp Feature: domain Description: malQ Location: 140400-142467 bp Feature: gene Location: 142732-144162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143092-143785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 092-143 785 bp Feature: gene Location: 144267-144476 bp Feature: gene Location: 144747-145121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SOBU01000003.1 (538625 bp)
Overview 1 RT 1: 59190-62815 bp Neighborhood of RT #1 [59190, 63102] RVT-GII KOG4768 Phage_int_SAM_4 INT_RitC_C_like DDE_Tnp_1 Feature: gene Location: 59190-59531 bp Feature: gene Location: 59924-60148 bp Feature: gene Location: 60154-60768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60217-60526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60217-60526 bp Feature: domain Description: KOG4768 Location: 60640-60727 bp Feature: domain Description: KOG4 768 Location: 6064 0-60727 bp Feature: gene Location: 60805-61695 bp Feature: domain Description: Phage_int_SAM_4 Location: 60862-60973 bp Feature: domain Description: Phage_int_SAM_4 Location: 60862-60973 bp Feature: domain Description: INT_RitC_C_like Location: 61063-61615 bp Feature: domain Description: INT_RitC_C_like Location: 61063-61615 bp Feature: gene Location: 61798-63102 bp Feature: domain Description: DDE_Tnp_1 Location: 62134-62815 bp Feature: domain Description: DDE_Tnp_1 Location: 62134 -62815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SOBU01000007.1 (307151 bp)
Overview 1 RT 1: 158424-164516 bp Neighborhood of RT #1 [158424, 164572] PRK09692 RVT-Retrons UvrD UvrD_C Feature: gene Location: 158424-158570 bp Feature: gene Location: 158590-159786 bp Feature: domain Description: PRK09692 Location: 158596-159754 bp Feature: domain Description: PRK09692 Location: 15 85 96-15 975 4 bp Feature: gene Location: 159948-161108 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 160191-160839 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 160191-160839 bp Feature: gene Location: 161311-162564 bp Feature: gene Location: 162812-164572 bp Feature: domain Description: UvrD Location: 162827-163739 bp Feature: domain Description: UvrD Location: 162827-163739 bp Feature: domain Description: UvrD_C Location: 164174-164516 bp Feature: domain Description: UvrD_C Location: 164174-1645 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT