myRT

myRT report for GCA_004365425.1_ASM436542v1

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Seq: SODG01000008.1 (300252 bp)
Overview 1 RT 1: 226276-231087 bp Neighborhood of RT #1 [226276, 231131] SplB RVT-UG2 Cdd Cdd Feature: gene Location: 226276-227517 bp Feature: domain Description: SplB Location: 226333-226966 bp Feature: domain Description: SplB Location: 226333-226966 bp Feature: gene Location: 227519-228112 bp Feature: gene Location: 228554-229993 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 228734-229646 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 228734-229646 bp Feature: gene Location: 230639-230908 bp Feature: domain Description: Cdd Location: 230792-230906 bp Feature: domain Description: Cdd Location: 230792-230906 bp Feature: gene Location: 230961-231131 bp Feature: domain Description: Cdd Location: 230970-231087 bp Feature: domain Description: Cdd Location: 230970-231 087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SplB, RVT-UG2, Cdd (COG0295)

Seq: SODG01000047.1 (3668 bp)
Overview 1 RT 1: 154-3356 bp Neighborhood of RT #1 [154, 3400] RVT_N RVT-GII GIIM zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 154-399 bp Feature: gene Location: 389-1930 bp Feature: domain Description: RVT_N Location: 440-665 bp Feature: domain Description: RVT_N Location: 440-665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728-1364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 8-1364 bp Feature: domain Description: GIIM Note: maturase Location: 1415-1649 bp Feature: domain Description: GIIM Note: maturase Location: 1415-1649 bp Feature: gene Location: 2006-3400 bp Feature: domain Description: zf-IS66 Location: 2153-2282 bp Feature: domain Description: zf-IS66 Location: 2 153-2 2 82 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2327-3224 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 32 7-32 2 4 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3245-3356 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32 45-3356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)