myRT

myRT report for GCA_004368515.1_ASM436851v1

Download annotations/find similar RTs

Seq: JZKB01000018.1 (81546 bp)
Overview 1 RT 1: 46-3158 bp Neighborhood of RT #1 [46, 3190] RVT-GII GIIM PRK12335 YvrE Feature: gene Location: 46-1425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-967 bp Feature: domain Description: GIIM Note: maturase Location: 1027-1234 bp Feature: domain Description: GIIM Note: maturase Location: 1 027-1 234 bp Feature: gene Location: 1590-2291 bp Feature: domain Description: PRK12335 Location: 1707-2199 bp Feature: domain Description: PRK1 2335 Location: 1 707-21 99 bp Feature: gene Location: 2288-3190 bp Feature: domain Description: YvrE Location: 2297-3158 bp Feature: domain Description: YvrE Location: 2297-31 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JZKB01000003.1 (999158 bp)
Overview 1 RT 1: 934523-940619 bp Neighborhood of RT #1 [934523, 940619] HTH_XRE COG4932 RVT-GII Intron_maturas2 HNHc SpaA TQ TQ LPXTG_anchor Feature: gene Location: 934523-934753 bp Feature: domain Description: HTH_XRE Location: 934550-934718 bp Feature: domain Description: HTH_XRE Location: 934550-934718 bp Feature: gene Location: 934959-936416 bp Feature: domain Description: COG4932 Location: 935328-936402 bp Feature: domain Description: COG4932 Location: 93532 8-936402 bp Feature: gene Location: 937031-938851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 937295-938123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9372 95-93812 3 bp Feature: domain Description: Intron_maturas2 Location: 938261-938495 bp Feature: domain Description: Intron_maturas2 Location: 9382 61-938495 bp Feature: domain Description: HNHc Note: nucleases Location: 938675-938822 bp Feature: domain Description: HNHc Note: nucleases Location: 938675-93882 2 bp Feature: gene Location: 938889-940160 bp Feature: domain Description: SpaA Location: 938958-939153 bp Feature: domain Description: SpaA Location: 938958-939153 bp Feature: domain Description: TQ Location: 939192-939549 bp Feature: domain Description: TQ Location: 939192 -939549 bp Feature: domain Description: TQ Location: 939561-939918 bp Feature: domain Description: TQ Location: 939561-939918 bp Feature: domain Description: LPXTG_anchor Location: 940059-940155 bp Feature: domain Description: LPXTG_anchor Location: 940059-940155 bp Feature: gene Location: 940437-940619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JZKB01000002.1 (1610406 bp)
Overview 1 RT 1: 573108-583032 bp Neighborhood of RT #1 [573108, 583334] Sipho_tail put_anti_recept SMC_prok_B SMC_prok_B SMC_prok_B Peptidase_S74 RVT-GII COG4824 CwlA SH3b Feature: gene Location: 573108-574580 bp Feature: domain Description: Sipho_tail Location: 573162-574575 bp Feature: domain Description: Sipho_tail Location: 573 162-574575 bp Feature: gene Location: 574577-580279 bp Feature: domain Description: put_anti_recept Location: 574664-575633 bp Feature: domain Description: put_anti_recept Location: 574664-57563 3 bp Feature: domain Description: SMC_prok_B Location: 576029-576479 bp Feature: domain Description: SMC_prok_B Location: 576029-576479 bp Feature: domain Description: SMC_prok_B Location: 577112-577430 bp Feature: domain Description: SMC_prok_B Location: 577112-57743 0 bp Feature: domain Description: SMC_prok_B Location: 577883-578138 bp Feature: domain Description: SMC_prok_B Location: 577883 -57813 8 bp Feature: domain Description: Peptidase_S74 Location: 579872-580079 bp Feature: domain Description: Peptidase_S74 Location: 579872-580079 bp Feature: gene Location: 581013-581771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581016-581610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 581016-581610 bp Feature: gene Location: 581856-582347 bp Feature: domain Description: COG4824 Location: 581952-582339 bp Feature: domain Description: COG4824 Location: 581952-5823 3 9 bp Feature: gene Location: 582378-583334 bp Feature: domain Description: CwlA Location: 582387-582855 bp Feature: domain Description: CwlA Location: 5823 87-582855 bp Feature: domain Description: SH3b Location: 582921-583032 bp Feature: domain Description: SH3 b Location: 582921-583 03 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JZKB01000008.1 (795108 bp)
Overview 1 RT 1: 2-3886 bp Neighborhood of RT #1 [2, 3894] RVT-GII GIIM PI-PLCc BglB Feature: gene Location: 2-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-617 bp Feature: domain Description: GIIM Note: maturase Location: 677-884 bp Feature: domain Description: GIIM Note: maturase Location: 677-884 bp Feature: gene Location: 1303-2292 bp Feature: domain Description: PI-PLCc Location: 1447-2272 bp Feature: domain Description: PI-PLCc Location: 14 4 7-2272 bp Feature: gene Location: 2470-3894 bp Feature: domain Description: BglB Location: 2488-3886 bp Feature: domain Description: BglB Location: 24 88-3886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JZKB01000010.1 (138114 bp)
Overview 1 RT 1: 135284-137922 bp Neighborhood of RT #1 [135284, 138113] MSMEG_0569_nitr MSMEG_0569_nitr RVT-GII GIIM Feature: gene Location: 135284-135553 bp Feature: gene Location: 135813-136856 bp Feature: domain Description: MSMEG_0569_nitr Location: 135822-136458 bp Feature: domain Description: MSMEG_05 69_nitr Location: 135 822-13645 8 bp Feature: domain Description: MSMEG_0569_nitr Location: 136629-136836 bp Feature: domain Description: MSMEG_05 69_nitr Location: 136629-136836 bp Feature: gene Location: 137040-138113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137043-137655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137043-13765 5 bp Feature: domain Description: GIIM Note: maturase Location: 137715-137922 bp Feature: domain Description: GIIM Note: maturase Location: 137715 -137922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JZKB01000011.1 (236837 bp)
Overview 1 RT 1: 2-1739 bp Neighborhood of RT #1 [2, 1739] RVT-GII GIIM Feature: gene Location: 2-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-6 17 bp Feature: domain Description: GIIM Note: maturase Location: 677-884 bp Feature: domain Description: GIIM Note: maturase Location: 6 77-884 bp Feature: gene Location: 1252-1533 bp Feature: gene Location: 1536-1739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JZKB01000013.1 (86259 bp)
Overview 1 RT 1: 46192-53125 bp 2 RT 2: 84171-86067 bp Neighborhood of RT #1 [46192, 53125] SpaA TQ TQ RVT-GII Intron_maturas2 HNHc TED COG4932 SpaA Neighborhood of RT #2 [84171, 86258] PTR Phage_head_fibr RVT-GII GIIM Feature: gene Location: 46192-46653 bp Feature: gene Location: 46684-48012 bp Feature: domain Description: SpaA Location: 46753-46948 bp Feature: domain Description: SpaA Location: 467 53-46948 bp Feature: domain Description: TQ Location: 46987-47344 bp Feature: domain Description: TQ Location: 46987 -47 344 bp Feature: domain Description: TQ Location: 47356-47713 bp Feature: domain Description: TQ Location: 47 356-47 7 13 bp Feature: gene Location: 48050-49870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48314-49142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48314-49142 bp Feature: domain Description: Intron_maturas2 Location: 49280-49514 bp Feature: domain Description: Intron_maturas2 Location: 49280-49514 bp Feature: domain Description: HNHc Note: nucleases Location: 49694-49841 bp Feature: domain Description: HNHc Note: nucleases Location: 49694-49841 bp Feature: gene Location: 50485-52200 bp Feature: domain Description: TED Location: 50677-50944 bp Feature: domain Description: TED Location: 5067 7 -50944 bp Feature: domain Description: COG4932 Location: 50971-51832 bp Feature: domain Description: COG4932 Location: 5097 1-51832 bp Feature: domain Description: SpaA Location: 51919-52108 bp Feature: domain Description: SpaA Location: 51919-52108 bp Feature: gene Location: 52772-53125 bp Feature: gene Location: 84171-84512 bp Feature: gene Location: 84743-85081 bp Feature: domain Description: PTR Location: 84908-84965 bp Feature: domain Description: PTR Location: 84908-84965 bp Feature: domain Description: Phage_head_fibr Location: 84983-85079 bp Feature: domain Description: Phage_head_fibr Location: 84983-8507 9 bp Feature: gene Location: 85185-86258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85188-85800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85188-85800 bp Feature: domain Description: GIIM Note: maturase Location: 85860-86067 bp Feature: domain Description: GIIM Note: maturase Location: 85860-86067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JZKB01000019.1 (291695 bp)
Overview 1 RT 1: 2-2811 bp Neighborhood of RT #1 [2, 2831] RVT-GII GIIM HTH_XRE COG4584 PRK13529 Feature: gene Location: 2-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-617 bp Feature: domain Description: GIIM Note: maturase Location: 677-884 bp Feature: domain Description: GIIM Note: maturase Location: 677-8 8 4 bp Feature: gene Location: 1169-1561 bp Feature: domain Description: HTH_XRE Location: 1184-1325 bp Feature: domain Description: HTH_XRE Location: 118 4-1325 bp Feature: domain Description: COG4584 Location: 1487-1550 bp Feature: domain Description: COG458 4 Location: 148 7-1550 bp Feature: gene Location: 1983-2831 bp Feature: domain Description: PRK13529 Location: 1986-2811 bp Feature: domain Description: PRK13529 Location: 198 6-28 11 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JZKB01000009.1 (122220 bp)
Overview 1 RT 1: 119571-122028 bp Neighborhood of RT #1 [119571, 122219] HTH_ARSR Peptidases_S8_Subtilisin_subset RVT-GII GIIM Feature: gene Location: 119571-119879 bp Feature: domain Description: HTH_ARSR Location: 119628-119832 bp Feature: domain Description: HTH_ARSR Location: 119 628-119 832 bp Feature: gene Location: 119921-120868 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 120071-120794 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 120071-12079 4 bp Feature: gene Location: 121146-122219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121149-121761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121149 -121761 bp Feature: domain Description: GIIM Note: maturase Location: 121821-122028 bp Feature: domain Description: GIIM Note: maturase Location: 121821-122028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT