myRT

myRT report for GCA_004369005.1_ASM436900v1

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Seq: PNRD01000007.1 (148776 bp)
Overview 1 RT 1: 83601-89143 bp Neighborhood of RT #1 [83601, 89145] hnRNP_Q_AcD SH3_3 YkgJ RVT-UG11 PRK05658 Feature: gene Location: 83601-84506 bp Feature: domain Description: hnRNP_Q_AcD Location: 83697-83772 bp Feature: domain Description: hnRNP_Q_AcD Location: 83697-83772 bp Feature: domain Description: SH3_3 Location: 84312-84477 bp Feature: domain Description: SH3_3 Location: 8431 2-84477 bp Feature: gene Location: 84693-85355 bp Feature: domain Description: YkgJ Location: 84870-85125 bp Feature: domain Description: YkgJ Location: 84870-851 25 bp Feature: gene Location: 85617-86372 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 85746-86193 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 85746-861 93 bp Feature: gene Location: 86988-87161 bp Feature: gene Location: 87301-89145 bp Feature: domain Description: PRK05658 Location: 87307-89143 bp Feature: domain Description: PRK05658 Location: 87307-891 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hnRNP_Q_AcD (pfam18360), SH3_3 (pfam08239), YkgJ (COG0727), RVT-UG11, PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: PNRD01000004.1 (649341 bp)
Overview 1 RT 1: 38139-42879 bp Neighborhood of RT #1 [38139, 42887] TIGR02646 COG3950 RVT-Retrons TetR_N TetR_C_13 Feature: gene Location: 38139-38912 bp Feature: domain Description: TIGR02646 Location: 38214-38736 bp Feature: domain Description: TIGR02 646 Location: 382 14-38736 bp Feature: gene Location: 38899-40515 bp Feature: domain Description: COG3950 Location: 39076-40414 bp Feature: domain Description: COG3950 Location: 39076-40414 bp Feature: gene Location: 40523-41461 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40622-41219 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4062 2 -412 19 bp Feature: gene Location: 41772-41915 bp Feature: gene Location: 42255-42887 bp Feature: domain Description: TetR_N Location: 42339-42462 bp Feature: domain Description: TetR_N Location: 42 339-42 462 bp Feature: domain Description: TetR_C_13 Location: 42540-42879 bp Feature: domain Description: TetR_C_13 Location: 42 540-42 879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, TetR_N (pfam00440), TetR_C_13 (pfam16925)

Seq: PNRD01000001.1 (1109281 bp)
Overview 1 RT 1: 540883-548081 bp Neighborhood of RT #1 [540883, 548107] Trp_halogenase RVT-UG13 KOG2143 KOG2143 PRK07883 Feature: gene Location: 540883-542385 bp Feature: domain Description: Trp_halogenase Location: 540922-542269 bp Feature: domain Description: Trp_halogenase Location: 540922-542269 bp Feature: gene Location: 542391-543101 bp Feature: gene Location: 543315-545138 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 543732-544197 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 543 73 2-544197 bp Feature: gene Location: 545420-545638 bp Feature: gene Location: 545894-548107 bp Feature: domain Description: KOG2143 Location: 545924-546185 bp Feature: domain Description: KOG2143 Location: 545924-546185 bp Feature: domain Description: KOG2143 Location: 547025-547568 bp Feature: domain Description: KOG2143 Location: 547025-547568 bp Feature: domain Description: PRK07883 Location: 547604-548081 bp Feature: domain Description: PRK07883 Location: 547604-548081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trp_halogenase (pfam04820), RVT-UG13, KOG2143 (KOG2143, Uncharacterized conserved protein ), PRK07883 (DEDD exonuclease domain-containing protein)