myRT

myRT report for GCA_004370425.1_ASM437042v1

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Seq: RWMK01000005.1 (459758 bp)
Overview 1 RT 1: 455696-459757 bp Neighborhood of RT #1 [455696, 459756] HxlR PRK06333 RVT-UG2 COG3666 Feature: gene Location: 455696-456202 bp Feature: domain Description: HxlR Location: 455720-456038 bp Feature: domain Description: HxlR Location: 455720-456038 bp Feature: gene Location: 456311-457579 bp Feature: domain Description: PRK06333 Location: 456317-457574 bp Feature: domain Description: PRK06333 Location: 45631 7-457574 bp Feature: gene Location: 458078-459424 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 458327-459113 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 458327-4591 1 3 bp Feature: gene Location: 459571-459756 bp Feature: domain Description: COG3666 Location: 459583-459757 bp Feature: domain Description: COG3666 Location: 459583-459757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, COG3666 (Transposase )

Seq: RWMK01000004.1 (627436 bp)
Overview 1 RT 1: 431375-441681 bp 2 RT 2: 457939-466777 bp Neighborhood of RT #1 [431375, 441683] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [457939, 466806] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 431375-432496 bp Feature: domain Description: COG3177 Location: 431393-432485 bp Feature: domain Description: COG3177 Location: 431393-432 485 bp Feature: gene Location: 432755-432892 bp Feature: gene Location: 433220-434905 bp Feature: domain Description: RVT_N Location: 433277-433517 bp Feature: domain Description: RVT_N Location: 4332 77-433517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433565-434201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 433565-4342 01 bp Feature: domain Description: GIIM Note: maturase Location: 434255-434486 bp Feature: domain Description: GIIM Note: maturase Location: 4342 55-434486 bp Feature: domain Description: HNH Note: nucleases Location: 434738-434876 bp Feature: domain Description: HNH Note: nucleases Location: 434738-434876 bp Feature: gene Location: 435986-439723 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 436094-436751 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 436094-436751 bp Feature: domain Description: PRK09776 Location: 436964-437435 bp Feature: domain Description: PRK09776 Location: 436964-437435 bp Feature: domain Description: PAS Location: 437492-438017 bp Feature: domain Description: PAS Location: 437492 -438017 bp Feature: domain Description: PRK10060 Location: 438026-439673 bp Feature: domain Description: PRK10060 Location: 43802 6-439673 bp Feature: gene Location: 439830-441683 bp Feature: domain Description: PRK05658 Location: 439842-441681 bp Feature: domain Description: PRK05658 Location: 439842 -441681 bp Feature: gene Location: 457939-459153 bp Feature: domain Description: PRK10770 Location: 457951-459145 bp Feature: domain Description: PRK10770 Location: 457951-459145 bp Feature: gene Location: 459212-462001 bp Feature: domain Description: LptD Location: 459407-461987 bp Feature: domain Description: LptD Location: 459407-461987 bp Feature: gene Location: 462134-463846 bp Feature: domain Description: RVT_N Location: 462191-462434 bp Feature: domain Description: RVT_N Location: 462 191-462 434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462479-463115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462 479-463115 bp Feature: domain Description: YkfC Location: 463325-463475 bp Feature: domain Description: YkfC Location: 46332 5-463475 bp Feature: domain Description: HNH Note: nucleases Location: 463652-463790 bp Feature: domain Description: HNH Note: nucleases Location: 463652 -463790 bp Feature: gene Location: 465119-466135 bp Feature: domain Description: COG3178 Location: 465122-466121 bp Feature: domain Description: COG3178 Location: 46512 2 -46612 1 bp Feature: gene Location: 466132-466806 bp Feature: domain Description: NTP_transferase_like_1 Location: 466138-466777 bp Feature: domain Description: NTP_transferase_like_1 Location: 466138-466777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)
PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: RWMK01000001.1 (995762 bp)
Overview 1 RT 1: 911565-918760 bp Neighborhood of RT #1 [911565, 918843] CHD CHD RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 911565-913109 bp Feature: domain Description: CHD Location: 911781-912195 bp Feature: domain Description: CHD Location: 911781-912195 bp Feature: domain Description: CHD Location: 912423-912912 bp Feature: domain Description: CHD Location: 912423 -912912 bp Feature: gene Location: 914193-914372 bp Feature: gene Location: 915104-916372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 915317-915974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9153 17-915974 bp Feature: domain Description: GIIM Note: maturase Location: 916052-916274 bp Feature: domain Description: GIIM Note: maturase Location: 916052-916274 bp Feature: gene Location: 916761-917393 bp Feature: domain Description: DUF772 Location: 916902-917097 bp Feature: domain Description: DUF772 Location: 916902-917097 bp Feature: gene Location: 918016-918843 bp Feature: domain Description: ABC_phnC Location: 918046-918760 bp Feature: domain Description: ABC_phnC Location: 918046-918760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)