myRT

myRT report for GCA_004371075.1_ASM437107v1

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Seq: RWMI01000040.1 (9401 bp)
Overview 1 RT 1: 5312-9398 bp Neighborhood of RT #1 [5312, 9398] HxlR PRK06333 RVT-UG2 Feature: gene Location: 5312-5818 bp Feature: domain Description: HxlR Location: 5336-5654 bp Feature: domain Description: HxlR Location: 5336-5654 bp Feature: gene Location: 5927-7195 bp Feature: domain Description: PRK06333 Location: 5933-7190 bp Feature: domain Description: PRK06333 Location: 5933-71 90 bp Feature: gene Location: 7694-9040 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7943-8729 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 7943-8729 bp Feature: gene Location: 9273-9398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2

Seq: RWMI01000005.1 (419170 bp)
Overview 1 RT 1: 328601-338907 bp 2 RT 2: 355165-364003 bp Neighborhood of RT #1 [328601, 338909] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [355165, 364032] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 328601-329722 bp Feature: domain Description: COG3177 Location: 328619-329711 bp Feature: domain Description: COG3177 Location: 32 8619-32 9711 bp Feature: gene Location: 329981-330118 bp Feature: gene Location: 330446-332131 bp Feature: domain Description: RVT_N Location: 330503-330743 bp Feature: domain Description: RVT_N Location: 330503-330743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330791-331427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 330791-33142 7 bp Feature: domain Description: GIIM Note: maturase Location: 331481-331712 bp Feature: domain Description: GIIM Note: maturase Location: 331481-331712 bp Feature: domain Description: HNH Note: nucleases Location: 331964-332102 bp Feature: domain Description: HNH Note: nucleases Location: 331964-332 102 bp Feature: gene Location: 333212-336949 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 333320-333977 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 33332 0-333977 bp Feature: domain Description: PRK09776 Location: 334190-334661 bp Feature: domain Description: PRK09776 Location: 334190-334661 bp Feature: domain Description: PAS Location: 334718-335243 bp Feature: domain Description: PAS Location: 334718-3352 43 bp Feature: domain Description: PRK10060 Location: 335252-336899 bp Feature: domain Description: PRK10060 Location: 3352 52 -336899 bp Feature: gene Location: 337056-338909 bp Feature: domain Description: PRK05658 Location: 337068-338907 bp Feature: domain Description: PRK05658 Location: 337068-338907 bp Feature: gene Location: 355165-356379 bp Feature: domain Description: PRK10770 Location: 355177-356371 bp Feature: domain Description: PRK10770 Location: 355177-356371 bp Feature: gene Location: 356438-359227 bp Feature: domain Description: LptD Location: 356633-359213 bp Feature: domain Description: LptD Location: 356633-3592 13 bp Feature: gene Location: 359360-361072 bp Feature: domain Description: RVT_N Location: 359417-359660 bp Feature: domain Description: RVT_N Location: 359417-359660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359705-360341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 359705-360341 bp Feature: domain Description: YkfC Location: 360551-360701 bp Feature: domain Description: YkfC Location: 360551-360701 bp Feature: domain Description: HNH Note: nucleases Location: 360878-361016 bp Feature: domain Description: HNH Note: nucleases Location: 360878-361016 bp Feature: gene Location: 362345-363361 bp Feature: domain Description: COG3178 Location: 362348-363347 bp Feature: domain Description: COG3178 Location: 362 348-363347 bp Feature: gene Location: 363358-364032 bp Feature: domain Description: NTP_transferase_like_1 Location: 363364-364003 bp Feature: domain Description: NTP_transferase_like_1 Location: 363364-364003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)
PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), YkfC (COG3344), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), NTP_transferase_like_1 (cd06422)

Seq: RWMI01000009.1 (216062 bp)
Overview 1 RT 1: 210034-215575 bp Neighborhood of RT #1 [210034, 215871] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 210034-211578 bp Feature: domain Description: CHD Location: 210250-210664 bp Feature: domain Description: CHD Location: 210250-210664 bp Feature: domain Description: CHD Location: 210892-211381 bp Feature: domain Description: CHD Location: 210892-2113 81 bp Feature: gene Location: 212662-212841 bp Feature: gene Location: 213573-214841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213786-214443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 213 786-214443 bp Feature: domain Description: GIIM Note: maturase Location: 214521-214743 bp Feature: domain Description: GIIM Note: maturase Location: 214521-214743 bp Feature: gene Location: 215230-215871 bp Feature: domain Description: DUF772 Location: 215380-215575 bp Feature: domain Description: DUF772 Location: 2153 80-215575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)