myRT

myRT report for GCA_004371195.1_ASM437119v1

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Seq: RWMY01000010.1 (233574 bp)
Overview 1 RT 1: 133583-144830 bp 2 RT 2: 161089-169911 bp Neighborhood of RT #1 [133583, 144832] NERD zf-C4_Topoisom COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [161089, 169940] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 133583-134353 bp Feature: domain Description: NERD Location: 133682-134015 bp Feature: domain Description: NERD Location: 1 33682-1 3401 5 bp Feature: domain Description: zf-C4_Topoisom Location: 134234-134348 bp Feature: domain Description: zf-C4_Topoisom Location: 1 34234-1 34348 bp Feature: gene Location: 134525-135646 bp Feature: domain Description: COG3177 Location: 134543-135635 bp Feature: domain Description: COG31 77 Location: 1 34543-1 35635 bp Feature: gene Location: 136369-138054 bp Feature: domain Description: RVT_N Location: 136426-136666 bp Feature: domain Description: RVT_N Location: 1 36426-1 36666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136714-137350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3671 4-1 37350 bp Feature: domain Description: GIIM Note: maturase Location: 137404-137635 bp Feature: domain Description: GIIM Note: maturase Location: 1 37404-1 37635 bp Feature: domain Description: HNH Note: nucleases Location: 137887-138025 bp Feature: domain Description: HNH Note: nucleases Location: 1 37887-1 38025 bp Feature: gene Location: 139135-142872 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 139243-139900 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 1 39243-1 39900 bp Feature: domain Description: PRK09776 Location: 140113-140584 bp Feature: domain Description: PRK09776 Location: 1 401 1 3-1 40584 bp Feature: domain Description: PAS Location: 140641-141166 bp Feature: domain Description: PAS Location: 1 40641 -1 41 1 66 bp Feature: domain Description: PRK10060 Location: 141178-142822 bp Feature: domain Description: PRK1 0060 Location: 1 41 1 78-1 42822 bp Feature: gene Location: 142979-144832 bp Feature: domain Description: PRK05658 Location: 142991-144830 bp Feature: domain Description: PRK05658 Location: 1 42991 -1 44830 bp Feature: gene Location: 161089-162303 bp Feature: domain Description: PRK10770 Location: 161101-162295 bp Feature: domain Description: PRK1 0770 Location: 1 61 1 01 -1 62295 bp Feature: gene Location: 162362-165136 bp Feature: domain Description: LptD Location: 162557-165122 bp Feature: domain Description: LptD Location: 1 62557-1 651 22 bp Feature: gene Location: 165269-166981 bp Feature: domain Description: RVT_N Location: 165326-165569 bp Feature: domain Description: RVT_N Location: 1 65326-1 65569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165614-166247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6561 4-1 66247 bp Feature: domain Description: YkfC Location: 166460-166610 bp Feature: domain Description: YkfC Location: 1 66460-1 6661 0 bp Feature: domain Description: HNH Note: nucleases Location: 166787-166925 bp Feature: domain Description: HNH Note: nucleases Location: 1 66787-1 66925 bp Feature: gene Location: 168253-169269 bp Feature: domain Description: COG3178 Location: 168256-169255 bp Feature: domain Description: COG31 78 Location: 1 68256-1 69255 bp Feature: gene Location: 169266-169940 bp Feature: domain Description: NTP_transferase_like_1 Location: 169272-169911 bp Feature: domain Description: NTP_transferase_like_1 Location: 1 69272-1 6991 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RWMY01000026.1 (60909 bp)
Overview 1 RT 1: 24638-30513 bp Neighborhood of RT #1 [24638, 30557] DEXHc_Snf RVT_N RVT-GII GIIM HNHc KOG0389 SF2_C_SNF resist_ArsH Feature: gene Location: 24638-24943 bp Feature: gene Location: 25080-26135 bp Feature: domain Description: DEXHc_Snf Location: 25299-25554 bp Feature: domain Description: DEXHc_Snf Location: 2 52 99-2 5554 bp Feature: gene Location: 26732-28450 bp Feature: domain Description: RVT_N Location: 26789-27026 bp Feature: domain Description: RVT_N Location: 2 6789-2 702 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27077-27728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7077-2 772 8 bp Feature: domain Description: GIIM Note: maturase Location: 27782-28013 bp Feature: domain Description: GIIM Note: maturase Location: 2 7782 -2 8013 bp Feature: domain Description: HNHc Note: nucleases Location: 28247-28403 bp Feature: domain Description: HNHc Note: nucleases Location: 2 82 47-2 8403 bp Feature: gene Location: 28536-29777 bp Feature: domain Description: KOG0389 Location: 28551-28671 bp Feature: domain Description: KOG0389 Location: 2 8551-2 8671 bp Feature: domain Description: SF2_C_SNF Location: 29217-29613 bp Feature: domain Description: SF2 _C_SNF Location: 2 92 17-2 9613 bp Feature: gene Location: 29835-30557 bp Feature: domain Description: resist_ArsH Location: 29859-30513 bp Feature: domain Description: resist_ArsH Location: 2 9859-30513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT