myRT

myRT report for GCA_004375165.1_ASM437516v1

Download annotations/find similar RTs

Seq: RWUL01000005.1 (476039 bp)
Overview 1 RT 1: 106611-115473 bp Neighborhood of RT #1 [106611, 115481] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 106611-107285 bp Feature: domain Description: NTP_transferase_like_1 Location: 106617-107256 bp Feature: domain Description: NTP_transferase_like_1 Location: 1 0661 7-1 07256 bp Feature: gene Location: 107282-108298 bp Feature: domain Description: COG3178 Location: 107285-108284 bp Feature: domain Description: COG31 78 Location: 1 07285-1 08284 bp Feature: gene Location: 109571-111283 bp Feature: domain Description: RVT_N Location: 109628-109871 bp Feature: domain Description: RVT_N Location: 1 09628-1 09871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109916-110552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0991 6-1 1 0552 bp Feature: domain Description: YkfC Location: 110759-110912 bp Feature: domain Description: YkfC Location: 1 1 0759-1 1 091 2 bp Feature: domain Description: HNH Note: nucleases Location: 111089-111227 bp Feature: domain Description: HNH Note: nucleases Location: 1 1 1 089-1 1 1 227 bp Feature: gene Location: 111416-114208 bp Feature: domain Description: LptD Location: 111611-114194 bp Feature: domain Description: LptD Location: 1 1 1 61 1 -1 1 41 94 bp Feature: gene Location: 114267-115481 bp Feature: domain Description: PRK10770 Location: 114279-115473 bp Feature: domain Description: PRK1 0770 Location: 1 1 4279-1 1 5473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: RWUL01000029.1 (26050 bp)
Overview 1 RT 1: 13727-24443 bp Neighborhood of RT #1 [13727, 24443] RhsA RhsA RhsA RhsA RHS_repeat RhsA RVT-UG1 SMC_prok_B SMC_prok_B Feature: gene Location: 13727-14707 bp Feature: domain Description: RhsA Location: 13730-14696 bp Feature: domain Description: RhsA Location: 13730-14696 bp Feature: gene Location: 14722-17427 bp Feature: domain Description: RhsA Location: 14854-15388 bp Feature: domain Description: RhsA Location: 14854-15388 bp Feature: domain Description: RhsA Location: 15406-15880 bp Feature: domain Description: RhsA Location: 15406-15880 bp Feature: domain Description: RhsA Location: 15889-16195 bp Feature: domain Description: RhsA Location: 15889-16195 bp Feature: domain Description: RHS_repeat Location: 16225-16276 bp Feature: domain Description: RHS_repeat Location: 162 2 5-162 76 bp Feature: domain Description: RhsA Location: 16279-17068 bp Feature: domain Description: RhsA Location: 162 79-17068 bp Feature: gene Location: 18170-21604 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 18416-18893 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 18416-18893 bp Feature: gene Location: 22063-23787 bp Feature: domain Description: SMC_prok_B Location: 22552-22846 bp Feature: domain Description: SMC_prok_B Location: 2 2 552 -2 2 846 bp Feature: domain Description: SMC_prok_B Location: 22975-23296 bp Feature: domain Description: SMC_prok_B Location: 2 2 975-2 32 96 bp Feature: gene Location: 23937-24443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RHS_repeat (pfam05593), RVT-UG1, SMC_prok_B (TIGR02168)