myRT

myRT report for GCA_004375495.1_ASM437549v1

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Seq: RWUM01000003.1 (475979 bp)
Overview 1 RT 1: 106602-115463 bp Neighborhood of RT #1 [106602, 115471] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 106602-107276 bp Feature: domain Description: NTP_transferase_like_1 Location: 106608-107247 bp Feature: domain Description: NTP_transferase_like_1 Location: 1 06608-1 07247 bp Feature: gene Location: 107273-108289 bp Feature: domain Description: COG3178 Location: 107276-108275 bp Feature: domain Description: COG31 78 Location: 1 07276-1 08275 bp Feature: gene Location: 109561-111273 bp Feature: domain Description: RVT_N Location: 109618-109861 bp Feature: domain Description: RVT_N Location: 1 0961 8-1 09861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 109906-110542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 09906-1 1 0542 bp Feature: domain Description: YkfC Location: 110749-110902 bp Feature: domain Description: YkfC Location: 1 1 0749-1 1 0902 bp Feature: domain Description: HNH Note: nucleases Location: 111079-111217 bp Feature: domain Description: HNH Note: nucleases Location: 1 1 1 079-1 1 1 21 7 bp Feature: gene Location: 111406-114198 bp Feature: domain Description: LptD Location: 111601-114184 bp Feature: domain Description: LptD Location: 1 1 1 601 -1 1 41 84 bp Feature: gene Location: 114257-115471 bp Feature: domain Description: PRK10770 Location: 114269-115463 bp Feature: domain Description: PRK1 0770 Location: 1 1 4269-1 1 5463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: RWUM01000034.1 (25966 bp)
Overview 1 RT 1: 13137-24463 bp Neighborhood of RT #1 [13137, 24463] RhsA RhsA RhsA RhsA RHS_repeat RhsA RVT-UG1 SMC_prok_B SMC_prok_B Feature: gene Location: 13137-14726 bp Feature: domain Description: RhsA Location: 13743-14715 bp Feature: domain Description: RhsA Location: 13743-14715 bp Feature: gene Location: 14741-17446 bp Feature: domain Description: RhsA Location: 14873-15407 bp Feature: domain Description: RhsA Location: 14873-15407 bp Feature: domain Description: RhsA Location: 15425-15905 bp Feature: domain Description: RhsA Location: 1542 5-15905 bp Feature: domain Description: RhsA Location: 15908-16217 bp Feature: domain Description: RhsA Location: 15908-162 17 bp Feature: domain Description: RHS_repeat Location: 16244-16295 bp Feature: domain Description: RHS_repeat Location: 162 44-162 95 bp Feature: domain Description: RhsA Location: 16298-17087 bp Feature: domain Description: RhsA Location: 162 98-17087 bp Feature: gene Location: 18181-21624 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 18427-18904 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1842 7-18904 bp Feature: gene Location: 22083-23807 bp Feature: domain Description: SMC_prok_B Location: 22572-22866 bp Feature: domain Description: SMC_prok_B Location: 2 2 572 -2 2 866 bp Feature: domain Description: SMC_prok_B Location: 22995-23316 bp Feature: domain Description: SMC_prok_B Location: 2 2 995-2 3316 bp Feature: gene Location: 23957-24463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RHS_repeat (pfam05593), RVT-UG1, SMC_prok_B (TIGR02168)