myRT

myRT report for GCA_004377885.1_ASM437788v1

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Seq: SNTF01000054.1 (21665 bp)
Overview 1 RT 1: 2372-6372 bp Neighborhood of RT #1 [2372, 6380] DcuC RVT-GII Asparaginase_2 Feature: gene Location: 2372-3733 bp Feature: domain Description: DcuC Location: 2375-3707 bp Feature: domain Description: DcuC Location: 2375-3707 bp Feature: gene Location: 3786-4157 bp Feature: gene Location: 4379-4825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4685-4787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4685-4787 bp Feature: gene Location: 4873-5022 bp Feature: gene Location: 5349-6380 bp Feature: domain Description: Asparaginase_2 Location: 5439-6372 bp Feature: domain Description: Asparaginase_2 Location: 5439-6372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)

Seq: SNTF01000113.1 (3195 bp)
Overview 1 RT 1: 224-3127 bp Neighborhood of RT #1 [224, 3192] Tra5 RVT-GII GIIM Tra5 Feature: gene Location: 224-655 bp Feature: domain Description: Tra5 Location: 230-647 bp Feature: domain Description: Tra5 Location: 2 30-647 bp Feature: gene Location: 766-996 bp Feature: gene Location: 1048-2289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1321-2053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 1-2 053 bp Feature: domain Description: GIIM Note: maturase Location: 2128-2284 bp Feature: domain Description: GIIM Note: maturase Location: 2 12 8-2 2 84 bp Feature: gene Location: 2881-3192 bp Feature: domain Description: Tra5 Location: 2893-3127 bp Feature: domain Description: Tra5 Location: 2 893-312 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: SNTF01000074.1 (11257 bp)
Overview 1 RT 1: 2906-5318 bp Neighborhood of RT #1 [2906, 5392] PHA02517 InsE RVT-GII RVT-GII group_II_RT_mat IS285 Feature: gene Location: 2906-3607 bp Feature: domain Description: PHA02517 Location: 2924-3602 bp Feature: domain Description: PHA02517 Location: 2924-3 602 bp Feature: gene Location: 3748-4050 bp Feature: domain Description: InsE Location: 3751-4036 bp Feature: domain Description: InsE Location: 3 751-403 6 bp Feature: gene Location: 4089-4292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4134-4290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 413 4-4290 bp Feature: gene Location: 4326-4562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4329-4509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 29-4509 bp Feature: gene Location: 4555-4767 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4558-4756 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4558-4756 bp Feature: gene Location: 4910-5392 bp Feature: domain Description: IS285 Location: 4940-5318 bp Feature: domain Description: IS285 Location: 4940-53 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, group_II_RT_mat (TIGR04416), IS285 (COG3328)