myRT

myRT report for GCA_004378135.1_ASM437813v1

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Seq: SNTM01000089.1 (3195 bp)
Overview 1 RT 1: 1-2964 bp Neighborhood of RT #1 [1, 2972] Tra5 RVT-GII GIIM Tra5 Feature: gene Location: 1-315 bp Feature: domain Description: Tra5 Location: 16-250 bp Feature: domain Description: Tra5 Location: 1 6-250 bp Feature: gene Location: 907-2148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1180-1912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 80-1 91 2 bp Feature: domain Description: GIIM Note: maturase Location: 1987-2143 bp Feature: domain Description: GIIM Note: maturase Location: 1 987-21 43 bp Feature: gene Location: 2200-2430 bp Feature: gene Location: 2541-2972 bp Feature: domain Description: Tra5 Location: 2547-2964 bp Feature: domain Description: Tra5 Location: 2547-2964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: SNTM01000045.1 (24221 bp)
Overview 1 RT 1: 15870-18282 bp Neighborhood of RT #1 [15870, 18356] PHA02517 InsE RVT-GII RVT-GII IS285 Feature: gene Location: 15870-16571 bp Feature: domain Description: PHA02517 Location: 15888-16566 bp Feature: domain Description: PHA02 517 Location: 15888-16566 bp Feature: gene Location: 16712-17014 bp Feature: domain Description: InsE Location: 16715-17000 bp Feature: domain Description: InsE Location: 16715-17000 bp Feature: gene Location: 17053-17256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17098-17254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17098-172 54 bp Feature: gene Location: 17290-17526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17293-17473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 93-17473 bp Feature: gene Location: 17584-17721 bp Feature: gene Location: 17874-18356 bp Feature: domain Description: IS285 Location: 17904-18282 bp Feature: domain Description: IS2 85 Location: 17904-182 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, IS285 (COG3328)

Seq: SNTM01000042.1 (27225 bp)
Overview 1 RT 1: 20846-24828 bp Neighborhood of RT #1 [20846, 24854] Asparaginase_2 RVT-GII DcuC Feature: gene Location: 20846-21877 bp Feature: domain Description: Asparaginase_2 Location: 20936-21869 bp Feature: domain Description: Asparaginase_2 Location: 2093 6-21869 bp Feature: gene Location: 22204-22353 bp Feature: gene Location: 22401-22847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22707-22809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22707-22809 bp Feature: gene Location: 23069-23440 bp Feature: gene Location: 23493-24854 bp Feature: domain Description: DcuC Location: 23496-24828 bp Feature: domain Description: DcuC Location: 23 496-24828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771)