myRT

myRT report for GCA_004380235.1_ASM438023v1

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Seq: MTXA01000106.1 (2076 bp)
Overview 1 RT 1: 120-2012 bp Neighborhood of RT #1 [120, 2026] DDE_Tnp_IS66 DDE_Tnp_IS66_C PHA02517 RVT-GII Feature: gene Location: 120-638 bp Feature: domain Description: DDE_Tnp_IS66 Location: 138-483 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 38-483 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 504-615 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 504-61 5 bp Feature: gene Location: 773-985 bp Feature: domain Description: PHA02517 Location: 776-920 bp Feature: domain Description: PHA0251 7 Location: 776-920 bp Feature: gene Location: 1577-2026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1850-2012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 850-201 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: MTXA01000013.1 (1407 bp)
Overview 1 RT 1: 65-941 bp Neighborhood of RT #1 [65, 1186] RVT-GII GIIM Feature: gene Location: 65-1186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86-668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86-668 bp Feature: domain Description: GIIM Note: maturase Location: 743-941 bp Feature: domain Description: GIIM Note: maturase Location: 743-941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MTXA01000053.1 (39928 bp)
Overview 1 RT 1: 34934-39917 bp Neighborhood of RT #1 [34934, 39925] prfC SLATT_5 RVT-UG17 Peptidase_S74 APC_N_CC Feature: gene Location: 34934-36520 bp Feature: domain Description: prfC Location: 34952-36518 bp Feature: domain Description: prfC Location: 3 4952-3 6518 bp Feature: gene Location: 37051-37755 bp Feature: domain Description: SLATT_5 Location: 37213-37723 bp Feature: domain Description: SLATT_5 Location: 3 7213 -3 7723 bp Feature: gene Location: 37733-39103 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 37961-38567 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3 7961-3 8567 bp Feature: gene Location: 39263-39391 bp Feature: gene Location: 39398-39925 bp Feature: domain Description: Peptidase_S74 Location: 39494-39641 bp Feature: domain Description: Peptidase_S74 Location: 3 9494-3 9641 bp Feature: domain Description: APC_N_CC Location: 39794-39917 bp Feature: domain Description: APC_N_CC Location: 3 9794-3 9917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884), APC_N_CC (pfam16689)