myRT

myRT report for GCA_004380725.1_ASM438072v1

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Seq: MTXX01000047.1 (2430 bp)
Overview 1 RT 1: 93-2222 bp Neighborhood of RT #1 [93, 2222] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 93-1760 bp Feature: domain Description: RVT_N Location: 141-378 bp Feature: domain Description: RVT_N Location: 1 41 -378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 429-1 071 bp Feature: domain Description: GIIM Note: maturase Location: 1122-1356 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 22-1 356 bp Feature: domain Description: HNHc Note: nucleases Location: 1566-1725 bp Feature: domain Description: HNHc Note: nucleases Location: 1 566-1 725 bp Feature: gene Location: 2040-2222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: MTXX01000016.1 (706512 bp)
Overview 1 RT 1: 104474-113133 bp Neighborhood of RT #1 [104474, 113270] DNA_BRE_C XerC RVT-UG8 RVT-UG3 INT_Rci_Hp1_C INT_P4_C Feature: gene Location: 104474-105844 bp Feature: domain Description: DNA_BRE_C Location: 104966-105566 bp Feature: domain Description: DNA_BRE_C Location: 104966-105566 bp Feature: gene Location: 105786-107078 bp Feature: domain Description: XerC Location: 105969-106974 bp Feature: domain Description: XerC Location: 105969-106974 bp Feature: gene Location: 107695-109704 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 108268-108712 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1082 68-108712 bp Feature: gene Location: 109701-110972 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 109983-110478 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 109983-110478 bp Feature: gene Location: 111193-111750 bp Feature: gene Location: 111804-113270 bp Feature: domain Description: INT_Rci_Hp1_C Location: 112182-112431 bp Feature: domain Description: INT_Rci_Hp1_C Location: 112 182 -112 431 bp Feature: domain Description: INT_P4_C Location: 112608-113133 bp Feature: domain Description: INT_P4_C Location: 112 608-113133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_BRE_C (cl00213), XerC (COG4973), RVT-UG8, RVT-UG3, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801)