myRT

myRT report for GCA_004405155.1_ASM440515v1

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Seq: SOPN01000111.1 (2251 bp)
Overview 1 RT 1: 713-1949 bp Neighborhood of RT #1 [713, 2089] RVT-GII GIIM Feature: gene Location: 713-2089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028-1658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028-1 658 bp Feature: domain Description: GIIM Note: maturase Location: 1742-1949 bp Feature: domain Description: GIIM Note: maturase Location: 1 742-1 949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SOPN01000059.1 (23205 bp)
Overview 1 RT 1: 648-3451 bp Neighborhood of RT #1 [648, 3480] RVT-GII GIIM DDE_Tnp_1_assoc DDE_Tnp_4 Feature: gene Location: 648-1166 bp Feature: gene Location: 1176-1550 bp Feature: gene Location: 1555-2145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561-1696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561-1696 bp Feature: domain Description: GIIM Note: maturase Location: 1765-1990 bp Feature: domain Description: GIIM Note: maturase Location: 1765-1990 bp Feature: gene Location: 2571-2771 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2625-2736 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2 62 5-2 736 bp Feature: gene Location: 2800-3480 bp Feature: domain Description: DDE_Tnp_4 Location: 2977-3451 bp Feature: domain Description: DDE_Tnp_4 Location: 2 977-3451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_assoc (pfam13808), DDE_Tnp_4 (pfam13359)

Seq: SOPN01000012.1 (123807 bp)
Overview 1 RT 1: 120433-123628 bp Neighborhood of RT #1 [120433, 123684] DUF664 DEDD_Tnp_IS110 DDE_Tnp_1 RVT-GII Feature: gene Location: 120433-120921 bp Feature: domain Description: DUF664 Location: 120466-120901 bp Feature: domain Description: DUF664 Location: 120466-120901 bp Feature: gene Location: 121088-121981 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 121094-121253 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 121094-121253 bp Feature: domain Description: DDE_Tnp_1 Location: 121502-121922 bp Feature: domain Description: DDE_Tnp_1 Location: 121502-121922 bp Feature: gene Location: 122734-123684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 122938-123628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12293 8-123 628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF664 (pfam04978), DEDD_Tnp_IS110 (pfam01548), DDE_Tnp_1 (pfam01609), RVT-GII

Seq: SOPN01000018.1 (102117 bp)
Overview 1 RT 1: 55209-61003 bp Neighborhood of RT #1 [55209, 61011] PRK07819 PRK07819 HTH_ARSR RVT-GII GIIM FldA Methyltransf_19 Feature: gene Location: 55209-56987 bp Feature: domain Description: PRK07819 Location: 55233-56067 bp Feature: domain Description: PRK07819 Location: 55233-56067 bp Feature: domain Description: PRK07819 Location: 56148-56985 bp Feature: domain Description: PRK07819 Location: 5614 8-56985 bp Feature: gene Location: 56992-57336 bp Feature: domain Description: HTH_ARSR Location: 57007-57220 bp Feature: domain Description: HTH_ARSR Location: 57007-57220 bp Feature: gene Location: 58406-59053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58409-58673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584 09-58673 bp Feature: domain Description: GIIM Note: maturase Location: 58754-58958 bp Feature: domain Description: GIIM Note: maturase Location: 58754 -58958 bp Feature: gene Location: 59138-59992 bp Feature: domain Description: FldA Location: 59441-59621 bp Feature: domain Description: FldA Location: 594 4 1-59621 bp Feature: gene Location: 60187-61011 bp Feature: domain Description: Methyltransf_19 Location: 60220-61003 bp Feature: domain Description: Methyltransf_19 Location: 60220-61003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07819 (3-hydroxybutyryl-CoA dehydrogenase; Validated), HTH_ARSR (smart00418), RVT-GII, GIIM (pfam08388), FldA (COG0716), Methyltransf_19 (pfam04672)

Seq: SOPN01000071.1 (12685 bp)
Overview 1 RT 1: 11170-12682 bp Neighborhood of RT #1 [11170, 12682] PRK11409 TIGR03252 RVT-GII GIIM Feature: gene Location: 11170-11427 bp Feature: domain Description: PRK11409 Location: 11182-11407 bp Feature: domain Description: PRK11409 Location: 11182-11407 bp Feature: gene Location: 11621-11758 bp Feature: domain Description: TIGR03252 Location: 11630-11720 bp Feature: domain Description: TIGR0325 2 Location: 11630-11720 bp Feature: gene Location: 11898-12449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11904-12072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11904-12072 bp Feature: domain Description: GIIM Note: maturase Location: 12159-12366 bp Feature: domain Description: GIIM Note: maturase Location: 1215 9-12366 bp Feature: gene Location: 12503-12682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11409 (YoeB-YefM toxin-antitoxin system antitoxin YefM), TIGR03252 (uncharacterized HhH-GPD family protein), RVT-GII, GIIM (pfam08388)