myRT

myRT report for GCA_004522145.1_ASM452214v1

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Seq: SDPR01000009.1 (184317 bp)
Overview 1 RT 1: 49459-53342 bp Neighborhood of RT #1 [49459, 53347] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49459-49917 bp Feature: domain Description: dut Location: 49465-49912 bp Feature: domain Description: dut Location: 49465-4991 2 bp Feature: gene Location: 50024-50620 bp Feature: domain Description: slmA Location: 50030-50606 bp Feature: domain Description: slmA Location: 50030-50606 bp Feature: gene Location: 50666-51625 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50801-51350 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50801 -51 350 bp Feature: gene Location: 51923-52579 bp Feature: domain Description: pyrE Location: 51941-52574 bp Feature: domain Description: pyrE Location: 51 941 -52574 bp Feature: gene Location: 52631-53347 bp Feature: domain Description: rph Location: 52634-53342 bp Feature: domain Description: rph Location: 52634-53342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: SDPR01000008.1 (184913 bp)
Overview 1 RT 1: 181772-184685 bp Neighborhood of RT #1 [181772, 184912] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 181772-181912 bp Feature: gene Location: 181925-182476 bp Feature: domain Description: SLATT_5 Location: 181931-182447 bp Feature: domain Description: SLATT_5 Location: 181931-182 447 bp Feature: gene Location: 182454-183824 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 182682-183288 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 182 682 -1832 88 bp Feature: gene Location: 183905-184237 bp Feature: gene Location: 184262-184912 bp Feature: domain Description: Peptidase_S74 Location: 184538-184685 bp Feature: domain Description: Peptidase_S74 Location: 184538-184685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)

Seq: SDPR01000035.1 (33046 bp)
Overview 1 RT 1: 18181-23079 bp Neighborhood of RT #1 [18181, 23079] PRK13704 RVT-GII Intron_maturas2 HNHc PRK10276 Feature: gene Location: 18181-18777 bp Feature: gene Location: 18774-20006 bp Feature: domain Description: PRK13704 Location: 19653-19998 bp Feature: domain Description: PRK13 704 Location: 19653 -19998 bp Feature: gene Location: 20198-22099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20465-21296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20465-21296 bp Feature: domain Description: Intron_maturas2 Location: 21410-21668 bp Feature: domain Description: Intron_maturas2 Location: 21410-21668 bp Feature: domain Description: HNHc Note: nucleases Location: 21842-22004 bp Feature: domain Description: HNHc Note: nucleases Location: 21842-22004 bp Feature: gene Location: 22457-22876 bp Feature: domain Description: PRK10276 Location: 22496-22862 bp Feature: domain Description: PRK10276 Location: 22496-22862 bp Feature: gene Location: 22912-23079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13704 (plasmid SOS inhibition protein A; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)