myRT

myRT report for GCA_004523835.1_ASM452383v1

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Seq: SOPJ01000006.1 (131452 bp)
Overview 1 RT 1: 69411-79333 bp Neighborhood of RT #1 [69411, 79437] TIGR02687 YeeA RVT-UG5 nitrilase YeeA YeeA Feature: gene Location: 69411-72014 bp Feature: domain Description: TIGR02687 Location: 69429-71982 bp Feature: domain Description: TIGR02687 Location: 69429-71 982 bp Feature: gene Location: 72223-73998 bp Feature: domain Description: YeeA Location: 72268-73930 bp Feature: domain Description: YeeA Location: 72268-73930 bp Feature: gene Location: 73998-77000 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 74460-74946 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 74460-74946 bp Feature: domain Description: nitrilase Location: 76212-76902 bp Feature: domain Description: nitrilase Location: 7621 2-76902 bp Feature: gene Location: 77031-77480 bp Feature: gene Location: 77503-79437 bp Feature: domain Description: YeeA Location: 78142-78853 bp Feature: domain Description: YeeA Location: 781 42-78853 bp Feature: domain Description: YeeA Location: 79009-79333 bp Feature: domain Description: YeeA Location: 79009-79333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), YeeA (COG1002), RVT-UG5, nitrilase (cl11424)

Seq: SOPJ01000132.1 (1847 bp)
Overview 1 RT 1: 336-1846 bp Neighborhood of RT #1 [336, 1846] RVT-Retrons Feature: gene Location: 336-1058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 339-603 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 339-603 bp Feature: gene Location: 1058-1846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: SOPJ01000028.1 (61346 bp)
Overview 1 RT 1: 47562-51736 bp Neighborhood of RT #1 [47562, 51736] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 47562-47882 bp Feature: gene Location: 48491-48919 bp Feature: domain Description: PHA02517 Location: 48515-48854 bp Feature: domain Description: PHA02517 Location: 48515-48854 bp Feature: gene Location: 49511-51034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49784-50516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49784-50516 bp Feature: domain Description: GIIM Note: maturase Location: 50591-50789 bp Feature: domain Description: GIIM Note: maturase Location: 50591-50789 bp Feature: gene Location: 51157-51492 bp Feature: domain Description: PHA02517 Location: 51160-51469 bp Feature: domain Description: PHA02517 Location: 51160-51469 bp Feature: gene Location: 51581-51736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: SOPJ01000101.1 (7610 bp)
Overview 1 RT 1: 1-1263 bp Neighborhood of RT #1 [1, 1376] RVT-Retrons Ogr_Delta Feature: gene Location: 1-381 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 151-382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 151-382 bp Feature: gene Location: 687-908 bp Feature: gene Location: 1104-1376 bp Feature: domain Description: Ogr_Delta Location: 1128-1263 bp Feature: domain Description: Ogr_Delta Location: 1128-1263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Ogr_Delta (pfam04606)