myRT

myRT report for GCA_004526155.1_ASM452615v1

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Seq: SPBG01000394.1 (2591 bp)
Overview 1 RT 1: 1-2341 bp Neighborhood of RT #1 [1, 2341] KilA-N RVT-GII GIIM Feature: gene Location: 1-339 bp Feature: domain Description: KilA-N Location: 79-229 bp Feature: domain Description: KilA-N Location: 79-229 bp Feature: gene Location: 462-1721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675-1344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675-1 344 bp Feature: domain Description: GIIM Note: maturase Location: 1434-1629 bp Feature: domain Description: GIIM Note: maturase Location: 1 434-1 629 bp Feature: gene Location: 1948-2097 bp Feature: gene Location: 2117-2341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KilA-N (pfam04383), RVT-GII, GIIM (pfam08388)

Seq: SPBG01000577.1 (2295 bp)
Overview 1 RT 1: 2-2120 bp Neighborhood of RT #1 [2, 2143] RVT-CRISPR GIIM Cas2_I_II_III cas1 Feature: gene Location: 2-625 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8-290 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 8-2 90 bp Feature: domain Description: GIIM Note: maturase Location: 371-566 bp Feature: domain Description: GIIM Note: maturase Location: 371-566 bp Feature: gene Location: 840-1142 bp Feature: domain Description: Cas2_I_II_III Location: 852-1089 bp Feature: domain Description: Cas2 _I_II_III Location: 852 -1089 bp Feature: gene Location: 1145-2143 bp Feature: domain Description: cas1 Location: 1154-2120 bp Feature: domain Description: cas1 Location: 1154-2 12 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, GIIM (pfam08388), Cas2_I_II_III (cl11442), cas1 (TIGR00287)

Seq: SPBG01000158.1 (3360 bp)
Overview 1 RT 1: 357-2422 bp Neighborhood of RT #1 [357, 3357] RVT-GII FTP M4_M36 Feature: gene Location: 357-488 bp Feature: gene Location: 610-831 bp Feature: gene Location: 828-1232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 831-1197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 1-1197 bp Feature: gene Location: 1420-3357 bp Feature: domain Description: FTP Location: 1423-1516 bp Feature: domain Description: FTP Location: 1423 -1516 bp Feature: domain Description: M4_M36 Location: 2101-2422 bp Feature: domain Description: M4_M3 6 Location: 2101-2422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, FTP (smart00607), M4_M36 (cd02699)

Seq: SPBG01000348.1 (2676 bp)
Overview 1 RT 1: 172-2669 bp Neighborhood of RT #1 [172, 2674] RVT-GII GIIM Fib_succ_major Feature: gene Location: 172-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 385-1054 bp Feature: domain Description: GIIM Note: maturase Location: 1135-1342 bp Feature: domain Description: GIIM Note: maturase Location: 1135-134 2 bp Feature: gene Location: 1487-1786 bp Feature: gene Location: 1997-2674 bp Feature: domain Description: Fib_succ_major Location: 2123-2669 bp Feature: domain Description: Fib_succ_major Location: 2123-2669 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Fib_succ_major (TIGR02145)

Seq: SPBG01000241.1 (2947 bp)
Overview 1 RT 1: 1-2888 bp Neighborhood of RT #1 [1, 2944] RVT_N RVT-GII GIIM cpn60 Feature: gene Location: 1-162 bp Feature: gene Location: 288-1889 bp Feature: domain Description: RVT_N Location: 390-630 bp Feature: domain Description: RVT_N Location: 390-630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-1338 bp Feature: domain Description: GIIM Note: maturase Location: 1392-1623 bp Feature: domain Description: GIIM Note: maturase Location: 1392-1623 bp Feature: gene Location: 1891-2028 bp Feature: gene Location: 2156-2944 bp Feature: domain Description: cpn60 Location: 2159-2888 bp Feature: domain Description: cpn60 Location: 215 9-2888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cpn60 (cd03343)

Seq: SPBG01000574.1 (2298 bp)
Overview 1 RT 1: 35-2295 bp Neighborhood of RT #1 [35, 2295] RVT_N RVT-GII GIIM Feature: gene Location: 35-352 bp Feature: gene Location: 463-2025 bp Feature: domain Description: RVT_N Location: 637-880 bp Feature: domain Description: RVT_N Location: 6 37-880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925-1561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925-156 1 bp Feature: domain Description: GIIM Note: maturase Location: 1612-1846 bp Feature: domain Description: GIIM Note: maturase Location: 16 12-1846 bp Feature: gene Location: 2077-2295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SPBG01000403.1 (2582 bp)
Overview 1 RT 1: 281-2328 bp Neighborhood of RT #1 [281, 2498] RVT_N RVT-GII GIIM Feature: gene Location: 281-508 bp Feature: gene Location: 542-1036 bp Feature: gene Location: 1023-2498 bp Feature: domain Description: RVT_N Location: 1095-1338 bp Feature: domain Description: RVT_N Location: 1095-1338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1383-2043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1383-2043 bp Feature: domain Description: GIIM Note: maturase Location: 2100-2328 bp Feature: domain Description: GIIM Note: maturase Location: 2100-2328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SPBG01000693.1 (2153 bp)
Overview 1 RT 1: 542-1809 bp Neighborhood of RT #1 [542, 1826] HTH_ARSR RVT-GII Feature: gene Location: 542-1057 bp Feature: domain Description: HTH_ARSR Location: 596-764 bp Feature: domain Description: HTH_ARSR Location: 596-764 bp Feature: gene Location: 1174-1470 bp Feature: gene Location: 1602-1826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1605-1809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1605-18 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), RVT-GII

Seq: SPBG01000180.1 (3245 bp)
Overview 1 RT 1: 1-2998 bp Neighborhood of RT #1 [1, 3006] RVT-GII YgiQ MhpC Feature: gene Location: 1-192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28-193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28-19 3 bp Feature: gene Location: 632-2158 bp Feature: domain Description: YgiQ Location: 998-1865 bp Feature: domain Description: YgiQ Location: 9 9 8-1865 bp Feature: gene Location: 2170-3006 bp Feature: domain Description: MhpC Location: 2215-2998 bp Feature: domain Description: MhpC Location: 2215-29 9 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YgiQ (COG1032), MhpC (COG0596)

Seq: SPBG01000102.1 (3792 bp)
Overview 1 RT 1: 2-3367 bp Neighborhood of RT #1 [2, 3367] CuRO_3_CotA_like RVT-GII RVT-GII GIIM Feature: gene Location: 2-877 bp Feature: domain Description: CuRO_3_CotA_like Location: 104-503 bp Feature: domain Description: CuRO_3_CotA_like Location: 10 4-503 bp Feature: gene Location: 981-1385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1260-1368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1260-1368 bp Feature: gene Location: 1563-2759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629-2247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1629-2247 bp Feature: domain Description: GIIM Note: maturase Location: 2301-2535 bp Feature: domain Description: GIIM Note: maturase Location: 2301-2535 bp Feature: gene Location: 3182-3367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CuRO_3_CotA_like (cd13891), RVT-GII, GIIM (pfam08388)