myRT

myRT report for GCA_004526165.1_ASM452616v1

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Seq: SPBC01000714.1 (2088 bp)
Overview 1 RT 1: 140-1798 bp Neighborhood of RT #1 [140, 1899] RVT-GII GIIM Feature: gene Location: 140-433 bp Feature: gene Location: 553-1899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1 525 bp Feature: domain Description: GIIM Note: maturase Location: 1585-1798 bp Feature: domain Description: GIIM Note: maturase Location: 1 585-1 798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SPBC01000059.1 (3986 bp)
Overview 1 RT 1: 2-3502 bp Neighborhood of RT #1 [2, 3651] RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66 Feature: gene Location: 2-922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 350-920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 350-92 0 bp Feature: gene Location: 1504-1887 bp Feature: gene Location: 2005-3651 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2512-2848 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 512 -2 848 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3085-3502 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3085-3502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050)

Seq: SPBC01000161.1 (3164 bp)
Overview 1 RT 1: 2-3160 bp Neighborhood of RT #1 [2, 3162] PBP1_ABC_uncharacterized_transporter PRK11091 PAS BaeS RVT-UG4 Feature: gene Location: 2-2062 bp Feature: domain Description: PBP1_ABC_uncharacterized_transporter Location: 155-407 bp Feature: domain Description: PBP1_ABC_uncharacterized_transporter Location: 155-407 bp Feature: domain Description: PRK11091 Location: 542-962 bp Feature: domain Description: PRK11091 Location: 542-962 bp Feature: domain Description: PAS Location: 962-1085 bp Feature: domain Description: PAS Location: 962-1085 bp Feature: domain Description: BaeS Location: 1295-2030 bp Feature: domain Description: BaeS Location: 1295-203 0 bp Feature: gene Location: 3001-3162 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3004-3160 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3 004-3 160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP1_ABC_uncharacterized_transporter, PRK11091 (aerobic respiration control sensor protein ArcB; Provisional), PAS (smart00091), BaeS (COG0642), RVT-UG4

Seq: SPBC01000176.1 (3090 bp)
Overview 1 RT 1: 45-3030 bp Neighborhood of RT #1 [45, 3030] DDE_Tnp_1 DUF772 RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 45-452 bp Feature: domain Description: DDE_Tnp_1 Location: 54-429 bp Feature: domain Description: DDE_Tnp_1 Location: 54 -4 29 bp Feature: gene Location: 483-653 bp Feature: domain Description: DUF772 Location: 510-642 bp Feature: domain Description: DUF772 Location: 510-64 2 bp Feature: gene Location: 719-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791-929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791-929 bp Feature: domain Description: GIIM Note: maturase Location: 980-1208 bp Feature: domain Description: GIIM Note: maturase Location: 980-1208 bp Feature: gene Location: 1359-2609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1563-2220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1563-2220 bp Feature: domain Description: GIIM Note: maturase Location: 2301-2520 bp Feature: domain Description: GIIM Note: maturase Location: 2301-2520 bp Feature: gene Location: 2653-3030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)