myRT

myRT report for GCA_004551525.1_ASM455152v1

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Seq: SATR01000409.1 (379 bp)
Overview 1 RT 1: 1-377 bp Neighborhood of RT #1 [1, 379] RVT-UNC RT_LTR Feature: gene Location: 1-187 bp Ori: TFH88800.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 40-163 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 40-1 63 bp Feature: gene Location: 215-379 bp Ori: TFH88801.1 Feature: domain Description: RT_LTR Location: 224-377 bp Feature: domain Description: RT_LTR Location: 224-377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19/RVT-UG26/RVT-UG28/RVT-UG11(RVT-UNC), RT_LTR (cd01647)

Seq: SATR01000135.1 (2171 bp)
Overview 1 RT 1: 587-2171 bp Neighborhood of RT #1 [587, 2171] RVT_N RVT-GII GIIM Feature: gene Location: 587-2059 bp Ori: TFH89058.1 Gene: ltrA Feature: domain Description: RVT_N Location: 635-878 bp Feature: domain Description: RVT_N Location: 635-878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 923-1550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 3-1550 bp Feature: domain Description: GIIM Note: maturase Location: 1610-1835 bp Feature: domain Description: GIIM Note: maturase Location: 1610-1835 bp Feature: gene Location: 1975-2171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SATR01000051.1 (19611 bp)
Overview 1 RT 1: 3616-10963 bp Neighborhood of RT #1 [3616, 11037] RVT_N RVT-GII GIIM TPR TPR_17 TPR_17 mycofact_TetR Feature: gene Location: 3616-4905 bp Feature: gene Location: 5030-5227 bp Feature: gene Location: 5143-6615 bp Ori: TFH89659.1 Gene: ltrA Feature: domain Description: RVT_N Location: 5191-5434 bp Feature: domain Description: RVT_N Location: 5191-543 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5479-6106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5479-6106 bp Feature: domain Description: GIIM Note: maturase Location: 6166-6391 bp Feature: domain Description: GIIM Note: maturase Location: 6166-63 91 bp Feature: gene Location: 7366-9393 bp Ori: TFH89660.1 Feature: domain Description: TPR Location: 8896-9100 bp Feature: domain Description: TPR Location: 8896-9100 bp Feature: domain Description: TPR_17 Location: 9109-9196 bp Feature: domain Description: TPR_17 Location: 9109-9196 bp Feature: domain Description: TPR_17 Location: 9202-9295 bp Feature: domain Description: TPR_17 Location: 9202-9295 bp Feature: gene Location: 10435-11037 bp Ori: TFH89661.1 Feature: domain Description: mycofact_TetR Location: 10462-10963 bp Feature: domain Description: mycofact_TetR Location: 10462-10963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TPR (smart00028), TPR_17 (pfam13431), mycofact_TetR (TIGR03968)

Seq: SATR01000094.1 (4367 bp)
Overview 1 RT 1: 1726-4320 bp Neighborhood of RT #1 [1726, 4322] DUF3265 RVT-Retrons Trypsin_2 DUF3265 Feature: gene Location: 1726-2184 bp Feature: gene Location: 2213-2329 bp Ori: TFH89222.1 Feature: domain Description: DUF3265 Location: 2246-2327 bp Feature: domain Description: DUF3265 Location: 224 6-2327 bp Feature: gene Location: 2320-4023 bp Ori: TFH89223.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2518-3124 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2518-3124 bp Feature: domain Description: Trypsin_2 Location: 3508-3928 bp Feature: domain Description: Trypsin_2 Location: 3508-3928 bp Feature: gene Location: 4230-4322 bp Ori: TFH89224.1 Feature: domain Description: DUF3265 Location: 4242-4320 bp Feature: domain Description: DUF3265 Location: 4 24 2-4 320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3265 (pfam11665), RVT-Retrons, Trypsin_2 (pfam13365)