myRT

myRT report for GCA_004556565.1_ASM455656v1

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Seq: SFGN01000085.1 (16198 bp)
Overview 1 RT 1: 702-4659 bp Neighborhood of RT #1 [702, 4673] Maff2 TraG-D_C RVT-GII Intron_maturas2 TraG-D_C TnpW Feature: gene Location: 702-917 bp Feature: domain Description: Maff2 Location: 705-912 bp Feature: domain Description: Maff2 Location: 705-91 2 bp Feature: gene Location: 992-1411 bp Feature: domain Description: TraG-D_C Location: 998-1172 bp Feature: domain Description: TraG-D_C Location: 998-1 1 72 bp Feature: gene Location: 1532-3352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1802-2633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 802-2633 bp Feature: domain Description: Intron_maturas2 Location: 2714-3044 bp Feature: domain Description: Intron_maturas2 Location: 271 4-3044 bp Feature: gene Location: 3946-4320 bp Feature: domain Description: TraG-D_C Location: 4123-4291 bp Feature: domain Description: TraG-D_C Location: 41 23-4291 bp Feature: gene Location: 4443-4673 bp Feature: domain Description: TnpW Location: 4614-4659 bp Feature: domain Description: TnpW Location: 461 4-4659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), TnpW (pfam14202)

Seq: SFGN01000075.1 (11652 bp)
Overview 1 RT 1: 4052-8593 bp Neighborhood of RT #1 [4052, 8593] RVT-AbiP2 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 4052-4381 bp Feature: gene Location: 4445-5170 bp Feature: gene Location: 5296-6819 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5725-6181 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 572 5-6181 bp Feature: gene Location: 6826-7350 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6862-7198 bp Feature: domain Description: DDE_Tnp_IS66 Location: 6862 -7198 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7222-7333 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 72 2 2 -7333 bp Feature: gene Location: 7481-8593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: SFGN01000220.1 (2787 bp)
Overview 1 RT 1: 1-2786 bp Neighborhood of RT #1 [1, 2786] RVT-GII Intron_maturas2 Feature: gene Location: 1-204 bp Feature: gene Location: 699-2489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1779 bp Feature: domain Description: Intron_maturas2 Location: 1863-2160 bp Feature: domain Description: Intron_maturas2 Location: 1863 -2160 bp Feature: gene Location: 2628-2786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: SFGN01000003.1 (112251 bp)
Overview 1 RT 1: 39326-43718 bp Neighborhood of RT #1 [39326, 43718] DUF3751 RVT-DGRs Feature: gene Location: 39326-39877 bp Feature: domain Description: DUF3751 Location: 39350-39791 bp Feature: domain Description: DUF3751 Location: 39350-39791 bp Feature: gene Location: 39877-41154 bp Feature: gene Location: 41576-42799 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 41870-42491 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 1870-4 24 91 bp Feature: gene Location: 42738-43001 bp Feature: gene Location: 43365-43718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3751 (pfam12571), RVT-DGRs

Seq: SFGN01000222.1 (3233 bp)
Overview 1 RT 1: 2-1921 bp Neighborhood of RT #1 [2, 2037] RVT-GII HNHc Feature: gene Location: 2-148 bp Feature: gene Location: 151-2037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1222 bp Feature: domain Description: HNHc Note: nucleases Location: 1771-1921 bp Feature: domain Description: HNHc Note: nucleases Location: 1771-1921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)