myRT

myRT report for GCA_004557515.1_ASM455751v1

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Seq: SFGX01000032.1 (23809 bp)
Overview 1 RT 1: 21260-23390 bp Neighborhood of RT #1 [21260, 23575] DegQ RVT-GII GIIM Feature: gene Location: 21260-21532 bp Feature: gene Location: 21679-22902 bp Feature: domain Description: DegQ Location: 21853-22891 bp Feature: domain Description: DegQ Location: 21 853-22891 bp Feature: gene Location: 23021-23575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23024-23123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23024-231 23 bp Feature: domain Description: GIIM Note: maturase Location: 23183-23390 bp Feature: domain Description: GIIM Note: maturase Location: 231 83-23390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), RVT-GII, GIIM (pfam08388)

Seq: SFGX01000089.1 (7281 bp)
Overview 1 RT 1: 3-4339 bp Neighborhood of RT #1 [3, 4524] RVT-GII VirD4 COG5421 Feature: gene Location: 3-215 bp Feature: gene Location: 253-1290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 59-457 bp Feature: gene Location: 1511-2473 bp Feature: domain Description: VirD4 Location: 1574-2336 bp Feature: domain Description: VirD4 Location: 1574-2 336 bp Feature: gene Location: 2698-4524 bp Feature: domain Description: COG5421 Location: 3232-4339 bp Feature: domain Description: COG542 1 Location: 32 32 -4339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, VirD4 (COG3505), COG5421 (Transposase )

Seq: SFGX01000061.1 (12427 bp)
Overview 1 RT 1: 34-1579 bp Neighborhood of RT #1 [34, 1587] RVT-GII COG3862 Feature: gene Location: 34-675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241-622 bp Feature: gene Location: 966-1130 bp Feature: gene Location: 1222-1587 bp Feature: domain Description: COG3862 Location: 1234-1579 bp Feature: domain Description: COG3 862 Location: 123 4-1579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3862 (Uncharacterized protein with two CxxC motifs )

Seq: SFGX01000040.1 (17274 bp)
Overview 1 RT 1: 15106-17162 bp Neighborhood of RT #1 [15106, 17212] RVT-GII Feature: gene Location: 15106-15477 bp Feature: gene Location: 15999-16160 bp Feature: gene Location: 16586-17212 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16778-17162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16778-17162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SFGX01000065.1 (10640 bp)
Overview 1 RT 1: 7641-10224 bp Neighborhood of RT #1 [7641, 10538] murC RVT-GII GIIM Feature: gene Location: 7641-8159 bp Feature: gene Location: 8290-9708 bp Feature: domain Description: murC Location: 8320-9670 bp Feature: domain Description: murC Location: 8320-9670 bp Feature: gene Location: 9720-10538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9729-9957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9729-995 7 bp Feature: domain Description: GIIM Note: maturase Location: 10011-10224 bp Feature: domain Description: GIIM Note: maturase Location: 10011-10224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT murC (TIGR01082), RVT-GII, GIIM (pfam08388)