myRT

myRT report for GCA_004558735.1_ASM455873v1

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Seq: SFDN01000023.1 (43193 bp)
Overview 1 RT 1: 218-3954 bp Neighborhood of RT #1 [218, 3992] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J Feature: gene Location: 218-547 bp Feature: gene Location: 567-2384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 840-1 662 bp Feature: domain Description: Intron_maturas2 Location: 1806-2025 bp Feature: domain Description: Intron_maturas2 Location: 1 806-2025 bp Feature: domain Description: HNHc Note: nucleases Location: 2217-2361 bp Feature: domain Description: HNHc Note: nucleases Location: 221 7-2361 bp Feature: gene Location: 2523-2975 bp Feature: gene Location: 2979-3992 bp Feature: domain Description: Bac_Flav_CT_J Location: 2985-3954 bp Feature: domain Description: Bac_Flav_CT_J Location: 2985-3954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_J (TIGR03782)

Seq: SFDN01000195.1 (2589 bp)
Overview 1 RT 1: 105-2398 bp Neighborhood of RT #1 [105, 2398] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 105-1937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369-12 00 bp Feature: domain Description: Intron_maturas2 Location: 1272-1587 bp Feature: domain Description: Intron_maturas2 Location: 12 72 -1587 bp Feature: domain Description: HNHc Note: nucleases Location: 1734-1908 bp Feature: domain Description: HNHc Note: nucleases Location: 1734-1908 bp Feature: gene Location: 2183-2398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: SFDN01000217.1 (2082 bp)
Overview 1 RT 1: 1-1748 bp Neighborhood of RT #1 [1, 2080] COG4646 matK RVT-GII Intron_maturas2 Feature: gene Location: 1-339 bp Feature: domain Description: COG4646 Location: 115-334 bp Feature: domain Description: COG4646 Location: 115-3 3 4 bp Feature: gene Location: 326-2080 bp Feature: domain Description: matK Location: 350-434 bp Feature: domain Description: matK Location: 3 50-43 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542-1364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542-13 64 bp Feature: domain Description: Intron_maturas2 Location: 1514-1748 bp Feature: domain Description: Intron_maturas2 Location: 1514-1748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), matK (CHL00002), RVT-GII, Intron_maturas2 (pfam01348)

Seq: SFDN01000166.1 (7329 bp)
Overview 1 RT 1: 3272-6940 bp Neighborhood of RT #1 [3272, 7083] HTH_26 RVT-UG5 nitrilase Feature: gene Location: 3272-3574 bp Feature: gene Location: 3683-3925 bp Feature: domain Description: HTH_26 Location: 3719-3887 bp Feature: domain Description: HTH_26 Location: 3719-3887 bp Feature: gene Location: 4066-7083 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4561-4999 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4 561-4 999 bp Feature: domain Description: nitrilase Location: 6274-6940 bp Feature: domain Description: nitrilase Location: 6274 -694 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_26 (pfam13443), RVT-UG5, nitrilase (cl11424)